Solanum pennellii: 107018249
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Entry
107018249 CDS
T04130
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107018249
Enzymes [BR:
spen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
107018249
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107018249
Prokaryotic type
107018249
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
HTH_NPRL3
Motif
Other DBs
NCBI-GeneID:
107018249
NCBI-ProteinID:
XP_015074162
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All DBs
Position
4:complement(76541789..76544034)
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AA seq
605 aa
AA seq
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MEKEPVPSSITEEPQPKKQKMSTTTTSDDEEYAAGAAAGAGAGDGSAPERKPRYKRRKVA
IFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVS
AVGQVVSGRFYVDPPGFIDRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFA
LDPYAHRDRESVLASLGSGKELVKCLNCPERGRKVAGVMGRRVFDPITQSVIIVDAPVVN
ANDPTTDTNMIIENEASLSEKVEERIDEVERSDENAKKEEQVEESVFCYGEKEKERFNRI
LKYFEGTHNFHNFTTRTKADDPAAKRFIISFNANTVVNVDGIDFVKCEVIGQSFMLHQIR
KMIGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEV
SLKAYLEEAEEFKVKYIYSHIASTEQKEGTMAVWLHSLNHRNYPDLRAVDIVKPAGGGLE
VVETAVEAGLGAVNNDESTDNVNSAVAGPEVIETVVEAGLGAVNNGENTDNINSAGAGPE
VVKTVVEAGLVAVNNGESTGNVNSAGDDSEVVKTVVEADLVALNNGESTNAKNGEAGHDA
DLINS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaaccagttccttcatcaattactgaagaaccacaacctaaaaagcagaaa
atgtccaccaccactacttctgacgacgaagaatacgccgccggcgccgctgctggtgct
ggtgccggagatggttctgctccggagaggaaacctagatacaagcgccggaaagtagca
atattctttgcttactgtggagtaggatatcagggtatgcagaagaatcctggagcaaaa
acaatcgaaggagatttagaagaagcactttatcaagcaggtggtgtgcctgaccatgat
aaatgtcaacccagaaagtacgagtgggctcgttctgctcgtactgataagggcgttagc
gctgtcggtcaagttgtttcgggtcggttttacgtcgatccgcctggttttattgatcgg
cttaactccattctcgttcctcaaatccggatctttgggtttaaacgtgtaacgaatgcg
ttcagtgccaagaagttttgtgataaacgtaggtatgtgtatttggttcctgtttttgct
cttgatccatatgcacatcgtgatagagaaagcgtgttagctagtttaggatctggaaaa
gagcttgttaagtgtttaaattgtccagaaaggggtcgtaaagtcgccggagtaatgggt
agacgtgtttttgatccaataactcagtcagttattattgttgatgcaccagtagttaat
gcaaatgatccgactactgatacaaatatgataattgaaaatgaagcttctttaagtgag
aaggttgaagaaaggattgatgaagtagagagaagtgacgaaaatgctaaaaaggaagaa
caagtggaagagagtgtgttttgctatggagagaaagaaaaagagagatttaacagaatt
ttgaagtactttgaaggaactcataattttcacaatttcacaactagaacaaaagctgat
gatcctgctgccaagcgatttatcatttcctttaatgcaaatactgtagttaatgttgat
ggcattgattttgtgaaatgtgaggttattggtcagagcttcatgcttcatcaaatccgt
aaaatgattggtcttgctgtagctatcatgagaaactgtgctcctgaatcgttaattgtg
actgccttccgaagggatgtcaacatcaatgttcccatggcccctgaggttggtttgtat
ttggacgaatgctttttcacctcatataacagtaagtggaaggacactcatgaagaagtg
tctctgaaagcttatttagaggaagcagaagaattcaaagtgaagtatatctatagtcat
attgcatcgacagaacaaaaggaagggacaatggctgtatggctgcattccctgaaccat
cgtaattaccctgatctgcgtgctgtggatattgttaaacctgctggtggtggtctggaa
gttgttgaaactgctgttgaggctggtttaggtgctgtcaacaatgatgagagcactgat
aatgttaattctgctgttgctggcccagaagttattgaaactgttgttgaggctggttta
ggtgctgtcaacaatggtgagaacaccgataatattaattctgctggtgctggtcctgaa
gttgttaaaactgttgttgaggctggtttagttgctgtcaacaatggtgagagcactggt
aatgttaattctgctggtgatgattcagaagttgttaaaactgttgttgaggctgattta
gttgctctgaacaatggtgagagcaccaatgcaaagaatggcgaggcagggcacgatgct
gatttgatcaactcatag
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