Solanum pennellii: 107018270
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Entry
107018270 CDS
T04130
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107018270
04121 Ubiquitin system [BR:
spen04121
]
107018270
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107018270
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107018270
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107018270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Rad50_zn_hook
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107018270
NCBI-ProteinID:
XP_015074190
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All DBs
Position
4:4223179..4227963
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AA seq
395 aa
AA seq
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MSSTYWCYRCNRFYRVWSEESITCPDCNTGFVEEIEAPTRSTLSGSRRRRFPPAVMQTAA
RSTDQSPASGYGSGSSPGVRRNRRNTGDRSPFNPVIVLRGSTNGGGAGGEGGGGGGGGGF
ELYYDDGTGSGLRPLPTSMSEFLLGSGFDRLLDQLAQIEANGIGRMENPPASKAAIESLP
TIEIIHSHIVAESCCAVCKEAFELGTEAREMPCKHLYHSDCILPWLSLRNSCPVCRHELP
SESRDVVDPNRAPSEQSEQSVATNNEVEEAVGLTIWRLPGGGFAVGRLGRRGGERALPVV
FTEMDGGFNNNNNNGVPRRISWGSRGSESRQSGGFRRFFGNLFSCFGGIGSSGSSSSSDS
RINQSRSSSMSSVFLATARRRRGWGFEANNGVRRW
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaacgtattggtgttatagatgcaataggttttacagagtatggagcgaggaa
tcgattacttgtcctgattgtaacacgggattcgttgaagaaattgaggctccgacccga
tccacgttgtccgggtcacggcgtcggcgtttccctccggcggtgatgcagacggcagcg
cggagtacggatcagtctccagcttcgggttatggttctgggtcaagtccgggtgttcgt
aggaacaggagaaatactggtgaccggtcgccgtttaatcctgtgatagtccttcgtggt
tctaccaatggaggtggtgcgggaggggaaggtggaggaggcggtggaggaggggggttt
gaactgtattatgatgatggaaccgggtcgggtttgagacctttacctacgagtatgtct
gagtttttactcgggtcgggtttcgataggcttttggatcagcttgcgcagattgaagct
aatggtattggaagaatggagaatccaccagcttcaaaagctgcaattgagtcattgcca
acaattgagataattcattctcatattgttgctgaatcttgttgtgcagtttgtaaagaa
gcatttgagttaggcactgaggcccgcgaaatgccctgtaaacatttataccattcagat
tgcatactcccatggctttcgttgcgcaattcgtgtccagtttgtaggcatgaattgccc
tcagagagtcgggatgttgtcgatccgaatagagcaccaagcgaacagagtgagcagagt
gtagcaacaaataatgaggtggaagaagctgttggattgacaatatggagattacctggt
ggtggatttgctgttgggagattaggtaggagaggtggggagagagctcttcctgttgta
ttcactgaaatggatggtggtttcaataataacaacaataatggagttccaaggaggatt
tcatggggttctagaggaagcgaatcgcgacaaagtggtggctttaggaggttttttggc
aacttgttttcgtgtttcggtggtattggttcatcagggtcaagctctagttcagattct
aggataaatcagagcagaagtagttcaatgtcatctgtctttcttgctacagcaagaaga
cgcagaggctggggtttcgaagctaataatggagttagaagatggtaa
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integrated database retrieval system
