Solanum pennellii: 107018354
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Entry
107018354 CDS
T04130
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107018354
Enzymes [BR:
spen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
107018354
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107018354
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
EcdD_BsdD_detox
Motif
Other DBs
NCBI-GeneID:
107018354
NCBI-ProteinID:
XP_015074304
UniProt:
A0ABM1GQ47
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All DBs
Position
4:complement(76592348..76600413)
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AA seq
560 aa
AA seq
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MAGEVAAAELIGVKHLSSAEAAAEEEKLRLLREAVHALPVSAVKDLWSIGACVRCIFRLF
GLHELMCSHPSLSISKWCDILEDVMRKKDGEFNEQSHQERSRETNFCKICLGILQFLYYD
DTGTLLKKYSADDFAVVISELVKQQYQQIDSFSLEVSLPSVVTENDQAVWLYMKNKYRHE
LWFQEKAECQFISTKDIFKLLVINPLQRLLGVKSTQSSFRVRLTYSHSDALTRDDVQEGN
GGNKRRKTDKAGFTGDLKTTGESVTPHVESFDSNIVDGDGLTKVCPKEAQDLSCNNLMAK
LDKIGKPCSLAIHCCRSSTYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIIGGAILPI
FQGDNYKFHAAGREDIDVRMLGTGRPFLVEIQNARQVPSEALIKEIEKKINSLESQYVRV
KNLRAVGSQGWDLMREGEAEKQKQYAALVWISRPVSDEDLQTISSLKELKVAQKTPIRVL
HRRSPLEREKIIHWMQVERVSGSSQYLLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGC
RTEILQLDVTDVKMDCFQEE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgaagttgcggcggcggagcttatcggcgtcaagcacttgagttcggctgaa
gctgcggcggaggaggagaagctacgtcttctccgcgaagccgtccatgcgctgccagtg
agcgccgtcaaagatttatggtccattggggcatgtgttcgatgcattttccgactattt
ggacttcatgaactcatgtgttcacatccttcactctcaatatcaaagtggtgtgatatt
ttagaagatgtaatgagaaagaaagatggagaatttaatgagcaatcacatcaagaacga
tcaagggagacaaacttttgcaaaatatgcttaggcattttgcaatttctctattatgat
gatactggaactttattaaaaaagtatagtgccgatgactttgctgtagtaatttctgaa
cttgtaaagcaacaatatcaacaaattgatagtttttctcttgaagtctcattgccttcg
gttgtaacagaaaatgatcaagcagtttggttgtatatgaagaataagtaccgccatgaa
ctttggttccaagagaaggctgaatgtcaattcatttctacaaaagacatcttcaaacta
ttagtgataaatccattacaaagattgttgggtgtaaaatctactcaaagttcttttcgc
gttcgcttaacatactcacattctgatgcattaacaagagatgacgttcaggaagggaat
ggaggaaataagaggaggaaaacagacaaagcaggtttcactggtgacctcaagacaact
ggggaatctgttactccccatgttgagtcttttgatagtaatattgttgatggagatgga
ctgactaaagtttgtcccaaggaggcccaagatctcagttgtaataacttaatggctaag
ttagataagatcggtaagccttgttctctggccattcattgctgtagaagctccacatac
attggagggagatatcttaagtattcaagaaatgtgagccagacacgctgggttattgat
gatgaacgaatgggagaagcatccgttgaggaaataataggtggggccatccttcctatc
ttccagggtgacaattataagtttcatgctgccggtagggaggacattgatgttcggatg
ctcggtacaggccgtccttttcttgtagagatacaaaatgcacgccaagtcccttctgaa
gcactcataaaagaaatagagaagaaaattaatagtctagaaagtcaatatgtccgggtt
aaaaatcttagagctgtaggcagtcaagggtgggacctcatgcgtgaaggagaggcagag
aagcagaagcagtatgctgcattggtgtggatttctcgtcctgtcagtgatgaagatttg
caaactatatcatcactaaaggaattgaaagttgctcaaaaaacgcctataagggttctt
catcgccgaagtccattggagagagagaaaattatacattggatgcaagtggagagggta
tctggaagctcacaatatcttctactgcatctgtgtacccaggctgggacatatatcaag
gaatttgttcacggggattttggtcgcactcaacctagtatcggttcaattcttggttgc
agaacagagatactgcaactcgatgttacggatgtgaaaatggattgctttcaggaagaa
tga
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