Solanum pennellii: 107018547
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Entry
107018547 CDS
T04130
Name
(RefSeq) mRNA-decapping enzyme subunit 2 isoform X2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
spen
Solanum pennellii
Pathway
spen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107018547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107018547
Enzymes [BR:
spen01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
107018547
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107018547
mRNA degradation factors
5'-3' decay
Decapping complex
107018547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
107018547
NCBI-ProteinID:
XP_015074541
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All DBs
Position
5:complement(77591943..77602068)
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AA seq
321 aa
AA seq
DB search
MSGLNRSSSAPSKNGLPPKELIDDLCSRFILNVPKEDQQSFERILFLVECAHWFYEDNTV
DNNPSLKSITLKEFTSLMFNNCDVLKPYVPHIDDIFKDFTSYKVRVPVTGAIILDETFER
CLLVKGWKGSSWSFPRGKKNKDEEDHSCAVREVLEETGFDVSKLLQKEQYLEMTFGQQRV
RLYIIAGVKEDASFAPQTKKEISEIAWQRLDELQPATNEIISRGMTGLKLYMVSPFLSSL
RSWISAHQPPVAPRFDRPSRGLSVWNAKNSSTGSSSVLAEIQLNKPAVDARPQDTGPGKS
FRNFRFDTASIYRAMEAGFSS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggctgaatcgatcttctagcgctccatcgaaaaatgggcttcctccgaaggaa
ctaattgacgatctttgcagtcggtttattttgaacgtgccaaaagaagatcagcaatca
tttgagaggattttgtttcttgtggagtgcgcacattggttttatgaagacaatactgtg
gacaacaatccgtcattgaagtctataaccctcaaggaatttacatccttaatgtttaac
aattgtgatgttttaaaaccatatgttcctcacatagatgacatattcaaggacttcacc
tcttacaaggttcgagttcctgtaactggggccatcatccttgatgagacttttgagcgg
tgcttgctagtaaagggatggaagggttcaagttggagttttccacgtgggaaaaagaac
aaggatgaagaggaccactcatgtgcagttagagaagtcttggaggaaacaggatttgat
gtctcaaaacttcttcagaaagagcaataccttgaaatgacttttggacagcaaagagtg
cggctttacataatagcgggagtgaaagaggatgcatcatttgccccacaaaccaaaaaa
gaaattagtgaaattgcatggcaaagactggatgaacttcaaccagcaactaacgaaatc
atatctcgtgggatgactggactcaagctctacatggtttctccatttttatcatctttg
agatcttggatttcagcacatcagcctcctgtagctcctagatttgatagaccttcaaga
ggattaagtgtgtggaatgcaaaaaatagttccaccggaagcagctcagttttagctgag
attcaattgaacaaacctgcagttgatgcacgtccccaggacacaggtcctggcaaaagc
ttcagaaacttccggtttgacactgcttcaatatatcgtgcaatggaagctggcttctct
tcttga
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