Solanum pennellii: 107018578
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Entry
107018578 CDS
T04130
Name
(RefSeq) protein transport protein Sec24-like CEF isoform X1
KO
K14007
protein transport protein SEC24
Organism
spen
Solanum pennellii
Pathway
spen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107018578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107018578
Membrane trafficking [BR:
spen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107018578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
107018578
NCBI-ProteinID:
XP_015074580
LinkDB
All DBs
Position
5:complement(77285694..77302952)
Genome browser
AA seq
1079 aa
AA seq
DB search
MEAPGGPRPGNVPPNYNPDALAHGMQHLEINRPTHPLTNPTGGPRPSATPFGQVPPSFAG
GMPANRPGPPPPGAFQRGPPQTTLPSNLVSRPTISPSVGQAPPSFASRPPPAGAVLHSAG
SPAIRPPPGALHSAPGPRAGPPGPFAASTGLFVPPSGVSSSASNGPPAFGPGTMQSGSRF
PPPSRPPDGAPLSMLSSGTPSQPPRMHPSFESPPSSTTSVTAQPPPPFLGSTQNVPPSSS
SSTFAPQVQAMPPPMVAPYGMQTLQTQPHQVAPLSVVPGPMQPRMMFGMASLHSNQAEAA
ITPSMGHAGSAFAGQSNFDSSQIPRPIPNSAVILHETRQGNKANPPPPATSDYIVWDTGN
CSPRFMRCTVNQIPCTSDLLTTSAMQLSLLVQPLARPHPSEQPIQVVDFGESGPVRCSRC
KGYINPFMKFIDQGRRFICNLCGYTDETPQDYHCNLGPDGRRRDADERPELCRGTVEFVA
TKEYMVREPMPAVYFFLIDVSMNAIQTGSTAAACSAISQVISDLPEGPRTLIGIATFDTT
IHFYNLKRARQQPLMLIVPDVRDVYTPLQSDVIVQLSECREHLELLLENIPTMFGHNKTA
DSAFGAAVKAAFLAMKNTGGKLLVFQSVLPSTGVGALSAREAEGRSAVSAAETEAHKLLQ
PADKTLKTMAIEFAEYQVCVDVFLTTQSYVDIASISVIPKTTGGQLYYYFPFSAISDAAK
LYNDLRWNITRPQGLEAVMRVRCSQGLQVNEYSGNYCKRIPSDVDLPAIDCDKTIMVTLK
HEDKLQDGSECSFQCALLYTTIYGQRRIRISTLSLPCTTMLSDLFRSADSDTQFACILKQ
AASEVPTAPLPQIREHMTNHCINIIYSYRKFCATVSSSGHLILADALKLLPLYTLALIKS
TGLRTDGPIDTRSFWINYVSPLSISLAIPWVHPRLIAIHELNTKENEESLIPPPIPLSSE
YINDNGIYLLENGEDCLIYVGNSADPGVMHQLLGISSVEQVPAQFVLQQHDNPFSKKLND
IINEIRCQRCNYLSLKLCKKGDSSGMLFFSNMVEDKTSIGLSYVEFLAHIHRHVQSKMA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaagctccagggggacctagaccagggaatgtaccacccaattacaatcctgatgca
cttgctcatggaatgcagcatttggaaattaatagacccacccacccacttacaaaccct
actggtggtcctaggcctagtgcaacaccttttgggcaggtgccaccctcttttgctggt
gggatgcctgcgaatcgtccaggacctcctccacctggtgcattccaaaggggtcctccg
caaactacattgccttcaaatctagtttctagaccaaccatttctccttctgtgggtcaa
gctccaccgtcctttgcatctaggccacctcctgctggtgcagtgcttcattctgctggt
agtcctgccattcgaccgccacctggtgctttgcattctgcaccgggtcctcgtgctggc
ccgccaggaccttttgctgcttcaacaggtctttttgtgcctccttcaggtgtttctagt
tcagctagtaatgggccacctgcatttggtccagggacaatgcagagtggatcacgtttt
cctcctccaagcaggccaccagatggagctcctctgtcaatgttatcatctggaactcct
tctcagcctccaaggatgcatccatcctttgagagtccaccttcaagcacaacatcagtt
actgcacaaccaccacctccatttctgggatcaactcagaatgtgccaccttcttcaagt
tcctccacatttgcaccacaggtccaagcgatgcctcctcctatggttgctccttatgga
atgcaaacattgcaaacacagccccatcaggttgctccactttctgttgtccctggtcca
atgcaaccacgtatgatgtttgggatggcgtctctgcattcaaatcaagcagaagctgca
ataactccttctatgggtcatgctggatctgcatttgctgggcaatcaaacttcgattcc
agtcaaattccacgcccaattccaaattctgcagtaatcttgcatgaaactcgtcaaggc
aataaagccaatccccctccgcctgccaccagtgactacattgtttgggatactggaaat
tgcagtccacggttcatgaggtgtactgtcaatcagattccatgcaccagtgaccttttg
acgacctctgcaatgcagttgtctctgttggtccaacccttggctcgtcctcatccgtct
gaacagcccattcaagttgttgattttggggaaagtggtcctgttcgttgctctcgctgc
aaaggttacataaatccttttatgaagttcattgatcagggaaggcgtttcatttgtaac
ttatgtggatatactgatgaaactcctcaggattatcactgcaacttaggtccagatggc
aggcgtcgagatgctgatgaaaggccagaactatgccgaggaactgttgaatttgtagct
actaaggaatatatggtgcgcgagccaatgcctgctgtatatttcttccttattgatgtc
tccatgaatgccatacaaactggttcaactgcagctgcttgcagtgcgataagccaagtc
atttctgatcttcctgaaggtcctcgaacattgatcggaattgctacatttgacacgact
atccatttttacaatctaaaacgtgcacggcagcagccattgatgcttattgtccctgat
gtccgagatgtttatactccccttcagagtgatgttattgttcaactctcggagtgccgt
gaacatctagagcttctcctagaaaacatcccaacaatgttcgggcataacaagactgct
gattcagcttttggtgctgcagtcaaggctgctttcttggcaatgaaaaacaccggaggg
aaacttcttgtatttcaatcagtcttgccttctactggtgttggagccctttctgctaga
gaggctgaaggaagaagcgcagtatcagctgctgaaacggaggctcacaaattactccaa
ccagcagacaaaaccctgaagacaatggctatcgagtttgctgagtatcaggtttgtgtt
gatgtgtttcttacaacacaatcatatgtagacatagcttccatttctgtcattcctaaa
actactggaggacagctgtactactatttccctttctctgctatttctgatgctgccaag
ctttacaatgatctgcgatggaacattactcggccccaagggcttgaggcagttatgcgt
gtaagatgcagtcagggtcttcaagttaacgagtactccgggaattattgtaaacgaatt
ccatcagatgttgacttacctgcgattgactgtgacaaaacaataatggtaacattgaag
catgaagacaaattgcaggatggttcagaatgctcttttcagtgtgctcttctttacacc
accatctatggccaaagaagaatcaggatttcaactctctctctgccttgcaccactatg
cttagtgatttgtttcgatcagctgactcggatacccaatttgcatgcatcttaaagcaa
gcggccagtgaagttccaacagcacctctcccacaaatccgagagcatatgacaaaccat
tgcattaacattatatactcttatcgtaaattttgtgctactgtctcatcctctggacat
cttattcttgctgatgcacttaagcttcttcctctttacacactggctctgattaaaagc
acgggattgcgaactgatggaccgattgatactaggtccttctggattaattatgtttcc
ccactgtccatttcattggctatcccttgggtgcaccctagattgatagccattcatgaa
ctcaatacaaaggagaatgaggaatctcttattcctcctcctattccactttccagtgaa
tatatcaatgacaacggtatctatcttcttgagaatggcgaggactgtttaatttatgtt
ggtaactctgcagatcctggtgttatgcatcaactgcttggcatttcatctgttgaacaa
gttcctgcacagtttgttctgcagcagcatgacaatccattctctaagaagctcaacgat
atcattaatgaaattagatgccaaagatgtaactatctcagcttaaaactatgcaaaaag
ggagattcatcaggtatgttgtttttctccaacatggtagaagacaagacatccattgga
ctttcgtatgtcgagtttctggcacatattcatcgacatgttcaaagcaaaatggcttga
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