KEGG   Solanum pennellii: 107018635
Entry
107018635         CDS       T04130                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
spen  Solanum pennellii
Pathway
spen03020  RNA polymerase
spen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107018635
  09124 Replication and repair
   03420 Nucleotide excision repair
    107018635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spen03021]
    107018635
   03400 DNA repair and recombination proteins [BR:spen03400]
    107018635
Transcription machinery [BR:spen03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107018635
  RNA polymerase III system
   RNA polymerase III
     107018635
  RNA polymerase I system
   RNA polymerase I
     107018635
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107018635
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N OB_RNR_1st NA-iREase1 DNA_pol3_alpha
Other DBs
NCBI-GeneID: 107018635
NCBI-ProteinID: XP_015074653
LinkDB
Position
5:74013193..74017999
AA seq 206 aa
MALSEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAK
RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTK
FHLEVFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYG
LKRGQVVKIIRPSETAGRYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggctctatcagaggaggagctctcaaaactttttagagttcgtaagacactgatggaa
atgttgtccgataggggctatcttgttggagattttgagataaatatgtcaaaacatcag
ttccttcagaagtatggtgagaacatgaagagagaagaccttgtaattcaaaaagccaaa
cgtaacaacagttctgatcagatatatgtgttctttccagaggagccaaaggttggtgtt
aagacaatgaaaacttatacagagcgcatgaaaaaagaagatgtgttccaagcaattctg
attgtacaacaaaatctgactccctttgctcgtacctgcataagtgaaatatctacaaag
ttccacttggaggtttttcaggaggcagaaatgttggtaaacataaaaaatcatgttcta
attcctgagcaccagctactttctcctgaagaaaagaagaccttgttggaaagatacact
gtgaaagaaacacagcttcctcggattcagatcaccgacccaattgctagatactacggg
ctaaaacgtggccaggtcgtgaaaattattagaccaagtgagactgcaggccgttatatt
acttatcgttatgtggtttaa

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