Solanum pennellii: 107018687
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Entry
107018687 CDS
T04130
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
spen
Solanum pennellii
Pathway
spen04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107018687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107018687
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
107018687
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PRIMA1
zf-C3HC4
NinF
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
107018687
NCBI-ProteinID:
XP_015074715
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Position
5:76737573..76744588
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AA seq
393 aa
AA seq
DB search
MLFQVGGQGTRPTFFEMAAAQQLPSSLRAALTYSLGVLALRRPFIHKILDYEDECFALLT
LVLETHSLRTTDGSFAESLYGLRRRAVNIKVKGDNKGPDAREEITHTGLEKRQKVLSVVF
LVILPYLRSKLHSIYNKEREAALQASLWGTEDERFGDTDYFDGNGNSIVSTSSSDTEESV
RDRLRKKIRKIVAVCYPWIHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE
LMDTSSRISKIRSRERERLRGPPWLKAVQSALLSCAYGVLDYAQTGLIAAVFFFKMMEWW
YQSAEERMSAPTVYPPPPPPPPPKVAKDGISLPTDRTLCPLCSQKRANPSVVAVSGLVFC
YSCVFRYVSQYKRCPVTLMPATVDHIRRLFHDV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctgca
caacagttaccttctagtcttagagctgctttaacttattcccttggtgttttagcttta
agaagacctttcatccacaaaattctagattatgaggatgagtgctttgctttgcttacg
ctagttcttgaaactcatagcttacgaactacagatgggtcttttgctgagtctttatat
ggtctgcgaagaagggcagttaacataaaagttaagggtgataacaaaggtccagacgcc
agagaagaaattactcacactgggttggagaagcgccaaaaagttctttcagttgtgttt
ctggttatattgccatatctcagatcaaaattgcattcaatctacaataaagaaagagag
gctgctcttcaagctagtttatggggcactgaggatgagagatttggtgacactgactat
tttgatggaaatggaaactccatagtttcaacaagcagttcagatacagaagaatcagtt
agagatcgtttgagaaagaaaatccgtaagatcgtagctgtttgctacccatggatacat
gctggaaatgaagggttatcatttgcttaccagctactgtatttgctggatgctactgga
ttttactctctaggactccatgcccttggcattcatgtctgtcgggctacaggacaggag
ctgatggatacttcttctaggatttctaaaataagaagccgtgaacgagagagacttcgt
ggccctccttggctaaaggcagtacaaagtgctttactaagttgtgcatatggagttctt
gactatgctcaaactggcctaatagcggcagtgtttttctttaaaatgatggagtggtgg
taccagtcagcagaagaaaggatgtcagctccgactgtttatccacccccaccccctcct
ccacctccaaaggttgcaaaagatggaatttcactacctacagacagaacactgtgtcct
ttgtgctcacaaaagcgtgcaaatccctcagtggtggcagtttcaggattagtcttctgc
tattcctgcgttttccgatatgtctctcagtataagcgatgccctgtgacgttgatgcct
gcaactgtggatcatatcagaagactatttcatgatgtttaa
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