Solanum pennellii: 107018776
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Entry
107018776 CDS
T04130
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Pathway
spen03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107018776
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107018776
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107018776
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107018776
Peptidases and inhibitors [BR:
spen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107018776
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107018776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
107018776
NCBI-ProteinID:
XP_015074829
LinkDB
All DBs
Position
5:75693328..75698327
Genome browser
AA seq
975 aa
AA seq
DB search
MGKRAKKRARSGVKETRNPVASANLIDEKSSPNIDTPDVAVVVVNDRKGCPHVDKVIDVG
KVSAKLESSEPVRCEDCREGAADRQASRTKGKHGKKKGSADPKQKSIANWVCLGCGHFSC
GGVGLPTTPQSHAVRHARQYHHPLAVQFENPQLRWCFLCNTLLHAKKVEDGSEQKDVLDD
IAKMIKRRPSEGPTTDVEAVWFGSGSVTSEIKSEASASISADGKGGCAIRGLVNLGNTCF
FNSIMQNLLAMNRLRDYFLKFDGFAGPLTADLKKLFIDTSNEAALKGSVNPKSLFGSICT
KAPQFRGYQQQDSHELLRCLLDRLCTEALTRRKLIKSSQDDGKSRSSCPTFVDEIFGGRL
SSTVSCLECGHTSVVYEPFLDLSLPVQTKKPPSKGAQSVSHAKISKPPKRSGKVFSNVSR
DAASLNSQRNGEKSLSHVYPRVPVTEGMILPSDTSLESIDAGVMADNTGLTSQDSCFTQK
SRNEETCEGVTRQLPMVDDSTWLDFLEQETLPNGDDGASEVDHILTNQGSETGSVQSVDP
LQNNLDSDTEMKLTCTNSTRSPNDLMCLDDQGQSKSPDCDIASEFSKKLLIKESEKISSV
DSNLGTDSFTRLSEDEAPLQLQESEILLLPYKEVTSTAGDMLNEGCEVSSAAVGREEVSF
NEPESDAQSLCNASVSQANGLREASFTVSNISMSDPEELDNTDAPVSVKSCLAYFTKPEL
LSKSEHAWQCENCTKVLKEKRMRSKNKLTKPRSHSMVNGHEDKNSDGVSSSGTFPKGTSP
RAARDSGSSLSENGTQENHSETSSQVNRDYQTNKVQLLEAPLISDISESEESENEETDYK
RVRVERDATKRILIDKVPPILSIHLKRFRQDARGRLSKLSCHVNFREAVDLKPYVDTRYL
QKDTYKYQLIGVVVHSGTMRGGHYVAYVRGGPKITGKEENAEDFVWYYASDTHVREVSLK
DVLRSEAYILFYEET
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagggctaaaaaaagggctagaagtggtgtcaaggagacgcgaaatcccgtt
gcatctgcaaatcttattgatgaaaagagcagtccgaatattgatactcctgatgttgcg
gttgttgttgtaaatgatagaaaaggatgtccacatgttgataaggttattgatgtgggc
aaagtctccgctaaacttgagtcttcggaacctgttaggtgtgaggattgcagggaagga
gcagctgatagacaagctagtaggacaaaaggtaagcatggaaaaaagaagggaagtgca
gatcccaagcagaagtctatagccaattgggtctgtttaggatgcggccatttctcgtgt
ggaggtgttgggttgcctactacacctcagagccatgcagttcggcatgcaagacaatac
catcaccctctcgctgtgcagtttgaaaatcctcaattgcgctggtgttttctgtgcaac
acactacttcatgctaaaaaagtagaggatggcagtgaacaaaaagatgtacttgacgac
attgcaaagatgattaaaaggcgtccgtctgaagggcctactactgatgtggaagctgtt
tggttcgggagtgggagtgtcactagcgaaattaaatcagaagcttctgcttctataagt
gctgatggaaaaggtggttgtgccattaggggattggttaatttagggaacacatgtttt
ttcaattcaataatgcagaacctactggcaatgaatagactaagggattactttcttaag
tttgatggttttgctggtcctcttaccgctgatctgaagaagctctttattgacacaagc
aatgaagctgcgttgaaaggatctgttaatccaaaatctttgtttggttcaatatgtacc
aaagctccacagtttcgaggataccaacagcaggacagtcacgaattgcttcgctgttta
cttgatcgtctgtgtactgaggcattgacccgcagaaagctaatcaaatcttctcaggat
gacggtaaatcccggagttcatgtccaacatttgtcgatgagatttttggtggtcgactc
tctagcactgttagctgtcttgaatgtgggcacacttcagtagtctatgaaccattcttg
gatctctccttgcctgttcagactaaaaaacctccttctaaaggagctcaatcagtctcc
catgccaaaatatcaaaacctccaaagagaagtggaaaagttttttctaacgttagcaga
gatgcagcttctctcaattctcaacgaaatggagagaaatctctcagccatgtgtatcct
agagtacctgtcactgaaggaatgatacttccttctgatacatcgctagaatccattgat
gctggtgttatggctgataatacgggtttaacttcacaggactcatgtttcactcaaaag
tcccgtaatgaggaaacttgcgagggtgtgactaggcagttgccgatggtggatgactcg
acatggttagattttctcgaacaggaaacactgccaaatggtgatgacggagcttcagaa
gttgatcacatcctgactaatcagggttctgaaactggatctgttcaatctgttgaccct
ttgcaaaataatctggactctgatacagagatgaagttgacatgtacaaacagcactcgt
tctcctaatgatttaatgtgtttggatgaccaaggacaatccaaatcaccagactgtgat
atagcttctgaattcagtaaaaagttactgattaaagagtctgaaaagatcagctctgtg
gattcaaatcttggaacagattcatttacgaggttatcggaagatgaagccccgttacaa
ctacaagagtcagagattctgttacttccatacaaagaagttacctcaactgctggcgac
atgttaaatgaaggttgtgaggtatcctcagctgctgttggtagggaagaagtttcattt
aatgagcctgagtctgatgcacagtctttgtgcaatgcttctgtttctcaggccaatgga
ctgagagaagctagttttactgtttcaaacatcagcatgtctgatccggaagagcttgat
aatacagatgctcctgtatcagtgaagagttgtttggcttattttacaaagcctgagctt
ctttccaaaagtgaacatgcttggcaatgtgaaaattgcacaaaagttctaaaagaaaag
agaatgagatctaagaataaattgacgaagcctagatcacatagcatggtaaatggacac
gaggacaaaaattcagatggtgtgtcttcttcaggaacattcccaaagggaaccagccct
cgagctgctcgagattcagggtcttcgctatcggaaaacggcacacaggaaaatcacagt
gaaactagcagtcaagtgaatagagactatcagaccaataaagttcaattgctggaagct
ccgctgatttctgatatatctgaatctgaagaaagtgagaatgaggagacagactataaa
agagttagagttgaaagagatgcaactaagcggatcctaattgataaggtccctcctatt
ttgtcaattcatctaaagaggttccgtcaagatgctcgggggcgcttgagtaagctgagt
tgccatgtcaattttagagaagcagttgatctgaaaccatatgttgacaccaggtacctg
cagaaggatacatacaaataccagcttattggtgtagtagtacattcggggacgatgagg
ggaggtcattatgttgcatatgttagaggaggtcccaagatcacagggaaagaagagaat
gcggaagattttgtctggtattatgcaagtgatactcatgttcgtgaggtttcattaaaa
gacgttcttcgctctgaggcatacattttattctacgaagaaacttga
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