KEGG   Solanum pennellii: 107018979
Entry
107018979         CDS       T04130                                 
Name
(RefSeq) protein RDM16-like isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107018979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107018979
Spliceosome [BR:spen03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    107018979
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 107018979
NCBI-ProteinID: XP_015075057
LinkDB
Position
5:76667627..76671902
AA seq 853 aa
MEREKSSKRARGSRDGDDDDHRRNRHRDEENRHRSDDRRRQDLERSIEREGNRDVGHDRE
DENQHQSDDRRRDRVREGSRDRAYDRERREITRDRDRREKSFELEVNREGSMERRNSRKR
KDRGENVDKKNVDEKRARDSEVKKDKLRVDNVKLMDKEDVEIDEEKGKGCEMRTVKEEPK
PELYEDGQDVDTIDTSVAMGSFSAASRTSPDKPLTRSDSPATKVSSISTTTENKGVNINK
FHKVLGKSSTDGAAHDTGKSAILSIDAKGNAYELKQRHKVLKEKLKRIPLLNKGANSTRD
GSSQMGSRESLKAPSTNVAILPPPVASSNAEILPTPGSARSTSTIATMVSANMLPSSLPH
VVGLTAQSYEAIKRAQEFSAKIEFRQDPECPSLINMFPGQMPPEVTIQPKLAKAPVLRLD
AFGREIDEQGNVVNVPKPSSTLKVNINKQNKESFQLLKPELDIDPDKNPHFDPRMGIDKN
KILRPKKMSFQFVEEGKWSRDAEIIKLKSQFGEIRTKELRTKQEQLAKAKAEPDINPNLI
EVSERIITKEKSKEPIPDVEWWEAPLLRSGAYGVMVDGNLTDDTLKMERITIYVEHPRPI
EPPAEPAPPPPQPLKLTKKEQKKMRTRRRMDQEREKQEMIRQGLLEPPKPKIKMSNLMRV
LGSEATQDPTKLEKEIRSAAAEREQAHIDRNLSRKLTPDEFREKKEKKLFDDPTIAPETV
VSVYRINDLSHPQYRFKVDVNAQENRMTGCAVILGDINVVVVEGGKKSIKRYGKLMLRRI
DWAAAVKKEDDDEDEDKPRNKCVLVWQGTVAKSSFHRFLVHECRTEAAARKVFADAGVLH
YWNLAVDFIDDEL
NT seq 2562 nt   +upstreamnt  +downstreamnt
atggagagagaaaaatcgagtaagagagcaagaggatccagggacggcgatgacgacgat
caccgccgtaatcgccaccgtgacgaggagaaccgacaccggtccgatgatcggcgacgt
caagaccttgagagatcgattgagcgggaaggaaacagagatgtaggtcacgatcgcgag
gatgagaatcaacatcaatccgatgatcggcgacgagatcgtgtgagggaaggaagcaga
gatagagcttatgatcgtgaaaggcgtgagataacacgtgatcgggatagacgggagaaa
tcgtttgagttggaagttaacagagagggttcaatggagagaaggaattcgcgtaagagg
aaagatagaggagagaatgtggataagaagaatgtcgatgagaagagagctagggattcg
gaggttaagaaggataaactgagagttgacaatgtgaagttgatggataaggaagatgtg
gaaatcgatgaagaaaagggaaaaggatgtgaaatgagaactgtgaaggaagaaccgaaa
ccagagctctatgaggatggacaggatgttgataccattgatactagtgtagcaatggga
tcattcagtgcagcatcaaggacttcccctgataagcctttgactcgtagtgattctcct
gctaccaaggtatcttcaatttctaccacaactgaaaataagggagttaatattaacaaa
tttcataaggttcttgggaaatctagtacagatggggcagctcatgacactggcaagagt
gcaatcttatccattgatgctaaaggaaatgcatacgagctcaaacaaaggcataaagtg
ctgaaagaaaagcttaagaggattcctttgttaaacaagggtgccaactctacgagagat
ggaagttcacaaatgggttccagggagagccttaaagccccttcaaccaatgtggcgata
ttgccaccaccagttgcatcttcaaatgcagagatattacccactccaggttcagcacgt
agcacatcaactatagctaccatggtatctgcaaatatgctacccagtagcttgcctcat
gttgtgggcctcacagcacagagctatgaagcgataaagcgtgcgcaggagttttctgct
aagattgaattccggcaggacccggaatgtccctccctcattaacatgtttcctgggcaa
atgcctccagaggttacaattcagccaaaacttgctaaagcccctgttcttcgtttggat
gcatttggcagggaaattgatgagcagggaaatgtggtcaatgtgcctaagccatctagc
acccttaaggtaaacatcaataagcagaacaaagagagcttccaacttctcaaacctgaa
cttgacattgatcctgataaaaatcctcattttgatccgaggatgggcattgacaagaac
aaaatattgaggcccaagaagatgtcatttcaatttgtggaggaaggtaaatggtcccga
gatgcagaaataatcaagttaaagagccaatttggtgaaatacgaacgaaggagctgagg
acaaagcaagagcaattggcaaaggcaaaagcagagcctgacataaatccaaatcttatt
gaggtgtcagagaggattatcaccaaagaaaaatcaaaggaaccaatccctgatgttgag
tggtgggaagctcctctgttacgatctggtgcttatggtgttatggtcgacggtaactta
actgatgatacattgaagatggagaggatcaccatttatgtggaacacccccgtcctatt
gagcctcctgctgaacctgctccacctcctccacagccattgaagctgaccaagaaggag
cagaagaaaatgcgcacccggcgccgtatggatcaggagagagaaaagcaggaaatgata
cgtcagggcctgttagaaccaccaaaaccaaaaattaaaatgagcaatcttatgagagtc
cttggatcagaagccactcaggatcccacaaagcttgaaaaggagattagaagtgctgct
gctgagcgagagcaggctcatatagacagaaatctttctcggaagctcactcctgatgag
tttcgtgagaagaaagaaaagaaactctttgacgacccaactattgcgccagagacagta
gtttcagtatacaggatcaatgacctttcacaccctcaatatcgcttcaaggttgatgtc
aatgcacaggagaatcgcatgaccgggtgtgcggttatcttgggagatataaatgtggtg
gtagttgaaggtggtaaaaagtcaatcaagcgatatgggaaactaatgcttaggcgaata
gattgggctgctgctgttaagaaagaagacgatgacgaagatgaagataagcctcgcaac
aagtgtgtgttagtctggcaagggactgttgctaaatcgagctttcataggtttttggtt
cacgagtgcaggactgaggctgctgctcgtaaggtctttgctgatgctggggttcttcat
tactggaatttagctgtagacttcatagatgatgaactttaa

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