Solanum pennellii: 107019065
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Entry
107019065 CDS
T04130
Name
(RefSeq) scarecrow-like protein 30
KO
K27753
GRAS family protein LISCL
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107019065
Transcription factors [BR:
spen03000
]
Eukaryotic type
Other transcription factors
GRAS
107019065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
Cohesin_load
PPR_3
Motif
Other DBs
NCBI-GeneID:
107019065
NCBI-ProteinID:
XP_015075133
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Position
5:complement(75153663..75157306)
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AA seq
746 aa
AA seq
DB search
MGQYHEAGSAVKLEDEDCSFFAYPNLINNLRVNDYFHDDYDPNLINNLRVSDNFVNRNVD
ISPFQSDVERNTLVPSTADDFHEDYDFSDGVLKYINQMLMEEDIEEKTCMFQESAALQAA
ERSFYEVIGEKYPSSTNHEKSSTLGQIERYAMGHYSGNDGRDGLLCPNWILDLGEDDVSL
VPDDVALDSTSRSSNSLSGTVPDVPVDSPVSTLRIPDIFSDGESVMQFKKGVEEASKFLP
TGNSLLASVRYHVVGKELRYKERKDAVVKVDKYGEKQYTERSRGKKNTFHEDVVDLTEGR
NNKQSAVFSESTVRSEMFDRVLLCSAGKNESALREALQAISRQNASKNGPSKGSNGKKLQ
RKKKGGKRDVVDLRTLLTLCAQAVAVGNQRTANELLKQIRESSSPMGDGMQRLAHYFADG
LEARMAGSGTHIYKALITRPVSAADILKAYHLLLAACPFRTMSSFFSNKTIMNLAEKAST
VHIIDIGIMWGFQWPGLIQRLASRPGGPPKLRITGIDFPNPGFRPAERVEETGRRLANYA
ESFKVPFEFNAIAQKWETVKLEDLKINKGEVLVVNCLYRFRNLLDETVVVNSPRDVFLNL
IRRLNPDVFIQGTVNGGYNAPFFISRFREALFHYSSLFDMLETIIPREVHERMLVEKNIL
GQEAMNAIACEGAERIERPETYKQWQVRILKAGFRQLPLDEEIMRMTTERFKVYDKNFII
DVDSEWLLQGWKGRIAVALSTWKAAY
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggggcaatatcatgaggcaggatctgcagttaaattagaggatgaagattgctcattt
ttcgcttatccgaatctgattaataatctcagagttaatgattactttcatgacgattat
gatccgaatttgataaataatcttagagttagtgataattttgtcaacaggaatgttgat
attagtccatttcaatctgatgtcgaacgaaatactttagtcccatcaactgcagatgac
tttcatgaggattatgatttcagtgatggggttctaaagtatataaatcagatgcttatg
gaagaggatattgaagaaaagacttgcatgtttcaagaatctgcagctcttcaagctgca
gaaagatcgttttacgaagttattggagagaagtatccttcttccacaaatcatgagaaa
tcgtccactttaggtcagattgaacgttatgctatgggccactatagtggaaatgatggt
cgtgatggtttactatgcccaaattggattcttgatcttggtgaggatgatgtgtcactt
gttcccgatgatgttgctttggattcaacttctcggtcatccaacagtttgtcaggcact
gtcccggatgtgcctgtggattctcctgtgagtacacttaggattcctgacatatttagt
gacggagagtctgttatgcagtttaagaaaggggtggaggaggcaagtaagttccttcct
acaggcaatagcttgcttgctagtgtgaggtatcatgtagtgggaaaggagctacggtat
aaagagaggaaagatgcagtcgtaaaggttgacaagtatggggaaaagcaatatactgaa
aggtcgagagggaagaaaaatacctttcatgaagatgtagtagatttaacggaagggaga
aataacaagcagtctgcagtgttttctgaatcaactgtccgatcggaaatgtttgatagg
gtgctgctatgcagtgcagggaaaaatgaatctgctcttcgtgaagccttgcaggctata
tcaaggcaaaatgcatcgaagaatggcccttcaaagggatctaacggtaagaagttacaa
cgaaagaaaaaagggggtaaaagagatgtggtagacttgagaacacttttgacactttgt
gcacaagctgttgctgtaggtaatcaacggaccgcaaatgagcttctgaagcagataagg
gaaagttcttctcctatgggggacggaatgcagaggttggcacattattttgctgacggt
cttgaggcacggatggctggttccggtactcatatctataaagcccttattacacggcct
gtatcagcagctgatatcttgaaagcgtaccatctactgcttgctgcctgcccgttcagg
actatgtctagctttttctcaaataagacaattatgaatctagctgaaaaggcttcaaca
gtacatattatagatattggcattatgtggggtttccaatggcctggcctcatacaacgt
ctcgcttctagaccaggtggacctcccaagcttcgtataactgggattgattttccaaat
cctggtttccgaccagcagaaagggttgaggaaactggtaggcggttagcaaattatgct
gagagcttcaaagttccttttgagttcaatgctatagcgcaaaagtgggaaacagttaaa
ctcgaggatcttaagatcaataagggtgaggttcttgtggtaaactgtctgtaccgtttt
aggaatctgcttgatgagactgtggtggtcaatagtccaagagatgtttttctgaatctt
atccggaggttgaatccagatgttttcatacagggaactgtaaatggtggttataatgcc
ccattctttatctcacgattccgtgaggctctttttcactactcatccttgtttgatatg
cttgaaactattattccccgggaagtgcacgagagaatgctggttgaaaagaatatactt
ggtcaggaggcaatgaatgccatcgcgtgtgaaggtgctgagagaattgagagaccagaa
acatacaagcaatggcaagttagaattctgaaggctggttttcggcagcttcctttggat
gaggagattatgagaatgacaacagaacgattcaaggtgtacgacaagaatttcattatt
gacgtagatagtgaatggctactgcagggctggaagggtcgtattgcagttgcactttca
acatggaaggcagcatattga
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