Solanum pennellii: 107019672
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Entry
107019672 CDS
T04130
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
spen
Solanum pennellii
Pathway
spen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107019672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107019672
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107019672
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
107019672
NCBI-ProteinID:
XP_015075558
UniProt:
A0ABM1GT08
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Position
5:complement(68533385..68535361)
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AA seq
276 aa
AA seq
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METFPSDNGEEVLIQLNNFIMQQAISEVMCMDLGFQLWNSPVTVTILLQEVIAVYPNFLN
STLTMKESARISNAFIVFQCMAYHPEARMGFLKGNIPYYLYPFFQISINVMKPLQFSILS
LIAALADFNEQYGQDTLLLLLDTQVFPLCLHCIRHGDQPILKVATLILMKMLMQQNGLKY
CCALPSRCLYVIQVLLQLVDTFASEIPCSQQLKYVVQCYLSLSRVTWAGGLYERVREMLP
LQLIENTFHNIIDHKDAEIPKMLNQLVRNLNHQPPQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttccccagtgataatggcgaagaggttcttattcaactcaataatttcatc
atgcaacaggcaattagtgaagtaatgtgcatggatcttggatttcagttgtggaactcc
cctgttacagtcaccatacttttacaggaagtaatagcagtgtaccccaacttcttaaac
tcaacattaaccatgaaggaatctgctcgaatttctaatgcttttattgtatttcagtgt
atggcgtatcacccagaggcaagaatggggttcctcaaaggtaacataccatattatctt
tacccctttttccaaatttcaataaatgtgatgaagcctctgcaatttagcatcttgtct
cttattgctgccctagcagatttcaatgagcaatatgggcaagacactcttcttttattg
ctagatacacaagtatttcctttatgcctgcattgtatccgtcatggtgatcaaccgata
cttaaggttgcaacactcatccttatgaaaatgttgatgcaacaaaatgggctaaaatat
tgttgtgctctcccctctcgttgtctgtatgtgatacaagtcctgcttcaactggtagac
acatttgcttctgaaatcccttgctcacagcagctaaaatatgttgttcaatgctaccta
agtctttcacgagtaacatgggcaggcgggttatatgaaagagtgagagaaatgcttcct
ctacagctaattgaaaacacttttcacaatattattgatcataaagatgcagagattcca
aaaatgctgaatcagttagtgcggaatctgaatcatcaaccacctcaatag
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