Solanum pennellii: 107019865
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Entry
107019865 CDS
T04130
Name
(RefSeq) transcription factor PRE6-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107019865
Transcription factors [BR:
spen03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107019865
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Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
bHLH_IRO3
SYCE1
CENP-F_leu_zip
Syntaxin_2
FAM120A
DUF948
SBP_bac_4HB
F36G3_coil
PUMA_CC
NleF_casp_inhib
RPW8
Motif
Other DBs
NCBI-GeneID:
107019865
NCBI-ProteinID:
XP_015075714
UniProt:
A0ABM1GTC4
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All DBs
Position
5:complement(2017214..2018899)
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AA seq
86 aa
AA seq
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MSSRRSRSRISDDQIADLVSKLQQLIPEIRNRRSDKVSASKVLQETCNYIRNLHREVDGL
SERLSQLLESTDSDSAQAAIIRSLLM
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagacgatcacgttccagaataagcgatgatcaaatcgctgatcttgtttcc
aagttgcaacaacttattcctgaaattcgtaatagacgttctgacaaggtttcagcttca
aaagtgcttcaagaaacttgcaactatataagaaatttacacagagaagtggatggatta
agtgagagattatcacaacttttggaatcaactgatagtgatagtgctcaagctgctatt
attagaagcttacttatgtag
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