Solanum pennellii: 107020084
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Entry
107020084 CDS
T04130
Name
(RefSeq) nuclear transcription factor Y subunit B-6-like
KO
K08065
nuclear transcription Y subunit beta
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107020084
Transcription factors [BR:
spen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
107020084
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
TFIID-18kDa
PP2C_C
Histone
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
107020084
NCBI-ProteinID:
XP_015075897
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Position
5:318163..320273
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AA seq
224 aa
AA seq
DB search
MDNGNHVGGSGNGGFHSYGRSPQPTPADPPSPDVEMSLELPAHLNQEVVEIISQEQDQVI
PNVARIMQSTHPSHVKISDDAKRTMYHCMSEFICFLTYEANAHCQREQRNTITVEDVDWV
INKFGFDDYIEPLPCYFPPNSEDDGGECGSLTRESLLKRPMVDTASSSNITPYNLPPNFP
MAHHHFVYPPPMGNGDMQGEASTSQCAGASVDTEVESPMEEDKE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggataatggtaatcacgttggtggttcaggaaatggaggatttcatagctatggcaga
tctccacaaccaacccctgcagatcctccttcccctgatgtggagatgagcctggaactg
cctgcacatctcaaccaggaagttgttgaaatcatcagtcaggagcaagaccaagtcatt
ccaaacgtggccagaatcatgcagagcacccatccttcccatgtcaagatatccgatgac
gccaagcggaccatgtaccattgtatgtctgagttcatatgctttttaacatatgaagcc
aacgcgcattgccagcgtgagcagcggaacacaatcactgtggaagacgtggattgggtc
attaacaagtttgggtttgatgactacattgaacccttgccttgctactttcctccaaat
agtgaggatgatggaggcgagtgtggatcccttacgagggagtctttgttgaagcgtcca
atggttgatacagcttcaagctccaatatcacaccctataaccttcctcctaattttcct
atggctcatcaccactttgtgtatccaccaccaatgggaaatggtgatatgcagggggag
gcaagcacttctcagtgtgcaggggcttcagtagatactgaagttgagtctcctatggag
gaggataaggagtga
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