Solanum pennellii: 107020102
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Entry
107020102 CDS
T04130
Name
(RefSeq) protein TSS
KO
K03255
protein TIF31
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spen03012
]
107020102
Translation factors [BR:
spen03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107020102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_1
TPR_8
Motif
Other DBs
NCBI-GeneID:
107020102
NCBI-ProteinID:
XP_015075908
UniProt:
A0ABM1GTU4
LinkDB
All DBs
Position
5:complement(72632254..72649326)
Genome browser
AA seq
1862 aa
AA seq
DB search
MAPNKNGRGKIKGDKKKKEEKVIPVAMDITVNLPDETHIILKGISTDRIIDFRRLLSVNT
ATCNITNFSLSHEVRGPRLKDTVDISALKPCVLTLIEEDYDEESATSHVKRLLDIVACTT
CFGPSVRDPGENSEATNESKSVKKSSKQRRNGKDKRSPSPPEGAAATATATAMTVDEDGE
MSNSCPKLGSFYEFFSLSHLTPPLQFIRRETRKVDEVLPNDYLFSLEVKLFNGKLVLVEA
CRKGFHNTGKHGILCHNLVDLLRQLSRAFDNAYNELMKGFLERNKFGNLPYGLRANTWLV
PPVAAQMPSIFPSLPVEDDKWGGNGGGLGRDGKSDLLPYASELLFIAYMPCKTTEERQVR
DRRAFLLHSLFVDVAISRAISAVRHIMEKVKPAHSDANREIIYNERVGDLSIFVTKDVAD
GSCKIDTKIDGCQTTGIAKKNLIERHLLKGITADENTAAHDIATLGVLNVRHCGYIATVK
VQGKESDKVGFPSESIELADQPDGGANALNINSLRYLLHAKDDNKVMHSKPSKSEEISSS
RAFVKRILEESLIKLQDQNIEGDSFIRWELGACWIQHLRDLKKSEKDKKPHTMKTKDEIK
VEGLGIHLKSLKNRKQNELQSESFKPVADSVDGRSEEDVIPSEDSQRESDANQNQLILKS
LLSDDGFTRLKESETGLHVKSVEELIDMSQKYYNEVALPKLVADFGSLELSPVDGRTLTD
FMHTRGLRMRSLGHIIKLSDKLSHVQSLCIHEMIIRAFKHILQAVIASVVEIEDLAAVIA
ATLNMMLGFPENDEQNEPHGIDPLVWRWLELFLKNRYEWETGILNYKDVRKITILRGLCH
KVGIELVPRDYDVNSPNPFRKEDIVSLVPVHKQAVCSSADGRQLLESSKTALDKGKLEDA
VSYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHSGDFNQATVYQQKALDINERELGLD
HPDTMKSYGDLAVFYYRLQHTELALNYVKRALYQLHLTCGPSHPNTAATYINVAMMEEGL
GNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILK
RKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPG
SDAKGRNAILAKRKGFASKVKGKSDQTNCASANSDTLKDVLEVKQDDQKLICKDDNDSQT
NEEPFDIVVMSNLNADRRISENNKPIEPKPLVEDTSLEKCVNGAVLSEPYAEADDGWQPV
QKPRSAGIYGQKLRQRWQTISKVTDFQNEGSISKVGHARLKNNYQAGRYFVLKKKTSDGN
DADYYVAKGPFPSTKLGRRVAKAVMYRVKSVTSSVRDVVALTSNTGGELLSSSAEQIQVC
AVKEAGPMPKRSSIVSLGISPSYKDVAVAPPGTMYMLQKSFSEDEVPDSPEVLELGEDAN
GEEQNFELMKSNAESIKLGDVQHLIADDAGNINDETVATDNKEGISLSYLGGGEISDVTC
PVMPSVQSSHVDVSPMEEEGVNTCNMCISDNFDSNGNSNVTLQEMEYPEVKASVSYSSDI
SRDLSNKQLSASAAPFSPFPAVARIVPLPMNINHPSGPGRLPPVGLWPMNMSVHPGTPTI
LPNPMCSSPHHSYHSPPPTPNMMHCLPFMYPSYSQPQMLPPTTFPVSSSAFHPNHYAWQC
NMTPKASDYVPGSVWSGCHPIEFSVSLPVVEPITESTLVSVTKESSDNSERSSPVPSFPV
DLISGDEVKAEANLPAPDAMETLNDIAEVGSEKVRAMNTLASEYITLSDNQSQKGDAPNE
NAGSCDNYIQRHPCKTDDEKTFNILIRGRRNRKQILRMPMSLLKRPYTSQPFKAVCCRVI
RD
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaacaagaatggtcgtggcaagataaaaggagacaagaagaagaaagaagaa
aaagttattcccgttgctatggatataacagtaaatcttccggatgagactcatattatt
ctaaagggaatatctaccgatagaataatcgattttcgtcgattattatcagtgaacaca
gcaacgtgtaatatcaccaatttttcattatctcatgaggtaaggggcccacgtttaaag
gacacggtggacatttccgccttgaagccatgcgtcctcacactcatagaagaggactac
gacgaagagagcgcgacgagtcacgttaaacgattgctggatatcgtcgcctgtacgacg
tgttttgggccgtctgttagagaccccggcgagaattctgaagctacaaatgaatcgaag
agcgttaagaaatcgagtaagcagcggagaaatggaaaggataagcgatctccttcaccg
ccggagggtgcggcggcgacggcgacggcgacggcgatgaccgtggatgaagacggagaa
atgagtaattcctgcccgaagcttggtagcttctacgaattcttctcactttctcatctc
acaccacctcttcagtttataagaagggaaacaagaaaggttgatgaagttctaccaaat
gattatcttttctcacttgaagtgaaactcttcaacgggaagttggttttggttgaagct
tgcagaaaaggttttcataacactggaaagcatgggatactttgtcacaatcttgtagat
ttgttgagacaactaagcagagcatttgacaatgcctacaatgaactcatgaaaggattt
ctggagcgtaacaagtttgggaatcttccttatggtctcagagccaacacatggcttgtt
ccccctgtggctgcacagatgccgtcaatctttccatctctgcctgtggaggatgacaag
tggggaggaaatggaggtggtctaggccgagatggaaaaagtgatttattaccttatgca
agtgaacttttgtttattgcatatatgccttgtaagacaacagaggagaggcaggttcga
gatagaagggcttttcttcttcatagtttatttgttgatgttgcaatttctcgggccatc
tcagctgtgcgacatataatggagaaagttaaaccagctcattctgatgcaaacagagaa
atcatttataatgagagagttggggacttgagcatatttgtcaccaaagatgtggcggat
ggtagctgcaaaatcgataccaaaattgatggatgtcaaacaaccggaatagctaagaaa
aatctgattgaaaggcatctactcaaggggattactgctgatgaaaatactgctgcccat
gatattgccactttaggtgttttgaatgtaaggcattgtggttatattgcgactgtaaaa
gttcaagggaaagagagtgacaaagtgggatttccatcggaaagcattgaacttgctgat
cagcctgatggtggtgcaaatgcgcttaatatcaacagtttaaggtatttgcttcatgcg
aaagatgacaacaaggtaatgcattcaaaaccctcaaaatctgaagagatcagttcctct
cgggcatttgtgaagagaatcctagaagagagtcttatcaagcttcaagatcagaatata
gaaggtgactcttttatcagatgggaacttggagcttgctggatacaacacttacgggat
ctaaagaaatcagagaaagataaaaaacctcatacaatgaagacaaaagatgagatcaag
gttgagggacttggaatacatctgaaatcccttaagaacagaaagcagaacgaactccag
tctgaaagcttcaaacctgtcgcagatagtgtagatgggagatccgaagaagatgtcatt
ccatcagaggattctcaacgtgagagtgatgccaatcaaaatcagctcatactgaagtca
ttgttgtcggatgatggttttactcgtctgaaagagtcggagaccggacttcacgttaag
tctgtggaagagctgattgatatgtcacagaagtactacaatgaagttgcccttccaaaa
ctggttgcagattttggatctctggaactctccccagttgatggtcgaaccttaactgat
ttcatgcataccagaggtctgcgaatgcgttctcttggacacattataaaactttcagac
aaattatctcatgtgcaatctctatgtatacacgagatgataataagagcttttaagcat
attctgcaagctgttattgcttcggtcgttgagatagaggatctggctgcagtaattgct
gctacattaaacatgatgcttgggtttcctgaaaatgatgaacaaaatgaaccccatggc
atagacccacttgtgtggagatggctggagttatttttaaagaatcgatatgaatgggag
actggcattttaaattacaaggatgtgaggaaaatcacaattcttcgaggtttatgccat
aaggtgggaatcgaacttgttccaagagattatgatgtgaattctccaaatccttttaga
aaggaagacattgtcagcctagtacctgtgcataagcaagctgtttgctcttctgcagat
gggcgacagcttttggaatcatcaaagacggctctggataagggtaaactcgaagatgct
gtcagctatgggactaaggctcttgctaagcttgttgcagtatgtggtccctaccataga
atgacagctggagcatatagccttttagctgttgttttgtatcacagcggtgattttaat
caggcaactgtctatcagcagaaagccctggacatcaatgaaagagagttagggcttgat
cacccagataccatgaaaagttacggggatcttgcagttttctattaccgacttcaacac
acagagttggctctcaattatgtaaagcgagctctttatcaattgcatctcacatgtggc
ccctcacatccaaacactgccgcaacatacataaatgtggctatgatggaagaagggctt
ggtaatgtgcatgttgccctcagatatctccataaagctctgaagtgcaatcaaaggtta
ctcggccctgaccatattcagactgctgcgagttaccatgctatagcaattgctctctct
ttgatggaagcttatcctttgagtgttcaacatgagcaaacaaccttgcagatactcaaa
aggaagcttggtccagatgaccttcgcacacaggatgctgctgcttggcttgagtatttc
gagtccaaggcttttgaacagcaagaagctgctcgaaatgggactaggaagccagatgca
tcaatagccagcaagggccatttaagtgtgtcggatttgctcgactatatcaatcctggt
tctgatgccaaagggagaaatgctattttagcaaaaagaaaaggctttgcctcaaaggta
aagggaaaatctgatcagaccaattgtgcctcagcaaactctgacactcttaaagatgtc
ctggaagtgaagcaagatgatcagaaactaatttgcaaagatgataatgattcccagacg
aatgaggaaccctttgacatagtagttatgtctaatctgaatgcagaccgaagaatttca
gagaacaacaaacccattgaacctaaacccttggtggaagacacttcgttggagaagtgt
gttaatggcgctgtcttatctgaaccttatgcagaagcagatgatggatggcagccagta
cagaaaccaagatcagctggtatttatggccaaaaactaagacagaggtggcaaaccatc
agcaaggtcactgattttcagaatgaaggctcaatttctaaagttggccatgctagattg
aagaataactatcaagctggtagatattttgtcttaaagaaaaagacatcagatggtaat
gatgcagattactatgtagcaaagggtccatttcccagtaccaaacttggtcgaagagtt
gccaaagctgtcatgtatcgggtcaagtccgtgacatcgtctgtcagagatgttgttgct
ttgacctctaataccggaggtgagttattaagttcttcagcggagcagattcaagtctgt
gcagtaaaagaggctggaccaatgccaaagaggagttccatagtaagcttaggaatatct
ccttcctacaaggatgtagcagttgccccaccaggtaccatgtatatgttgcagaagagc
ttttctgaagacgaagttcctgatagtccagaagttctggaacttggagaagatgccaat
ggagaggaacaaaattttgagctaatgaaaagcaatgcagaatccatcaagctgggggac
gttcagcatcttattgcagatgatgctggtaatataaatgatgaaacagtagctactgac
aacaaagaaggaatttctttgagttatttgggaggtggtgaaatttcagatgtcacatgt
ccagtcatgccttcagttcaatccagccatgttgatgttagtccaatggaagaggaaggt
gtcaacacttgcaacatgtgtatttctgacaattttgattcaaatggtaattcaaatgtt
acgttacaagagatggagtacccagaggtaaaagcttcagtatcttattcaagtgatatt
agtcgagatttgtccaataaacagttatctgcatcagcggcacccttcagcccattccca
gccgttgctcgtatagtgccactgcctatgaacattaatcacccttctggtcctggaaga
ctaccaccagtaggtctttggccaatgaatatgagtgttcatccaggaacacccactatt
ttgcccaacccaatgtgctcctcccctcatcactcatatcattcacctccgcccacccca
aacatgatgcactgtttgccctttatgtacccttcctattctcaaccccagatgttacct
ccaactacattcccagtaagcagcagcgctttccatcccaatcattatgcttggcagtgc
aatatgactcctaaagcatcagattatgttcctggctcagtttggtctggctgccatcca
atagagttctctgtctcgctacctgtggttgaaccaattactgagtcaactttggtttca
gtcacaaaagagtcatctgataattctgagcgctcgagtccggtaccaagctttcctgtt
gatctcatctctggggatgaggttaaggcagaagcaaatcttccagcaccagatgccatg
gaaactttgaatgatatagctgaggttggatcagaaaaagtgagagcaatgaacacattg
gcttcagagtacattaccttgtcggacaatcaatcacagaagggtgacgctccaaatgag
aatgctggatcctgtgataattacatacagagacacccttgtaagactgatgatgagaag
actttcaacattttaataaggggtaggaggaaccgcaaacaaattctgagaatgccgatg
agtttgcttaagagaccatatacttctcagcccttcaaagctgtatgttgcagggtaata
agagactga
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