Solanum pennellii: 107020282
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Entry
107020282 CDS
T04130
Name
(RefSeq) putative late blight resistance protein homolog R1A-4
KO
K13453
disease resistance protein
Organism
spen
Solanum pennellii
Pathway
spen04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107020282
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
WH_DRP
Rx_N
NB-LRR
AAA_22
AAA_16
AAA_14
ATPase
RuvB_N
nSTAND3
AAA
AAA_18
NACHT
AAA_33
NTPase_1
Motif
Other DBs
NCBI-GeneID:
107020282
NCBI-ProteinID:
XP_015076062
LinkDB
All DBs
Position
5:6809490..6820505
Genome browser
AA seq
1820 aa
AA seq
DB search
MAKECRDAIGTINLVKGQHLDRRTTDQLEDAIKHLTHVAVFLTNLEKRHPANGISGHLRP
LFLEAHDGFSLMCSHPPRSQFTVKLENIAEKFKSSKASRSTRQVIPELLQIIEPENIAKR
IKASKPSRSSSPITVDMVGFIESLLGSVHRALFFISAGPPVSMLDKKLRHLQVFFTLISK
RGIEHESMKDLFYHVEDVAYTAAQLCVLGSSCHMDDEFSKLLERISRPFSPGLRQVYLNA
LIGLNSSRSKTTMNAKYMLDFVSALQDDLRLRCDNRIRWLQRGLSYLCRFLRDIESYPVS
HRQLISLQLNMEYLAIGSANAIYSFDEDMDKTSEIDHELFHLQMKFNYVKVEVDLIRLQN
IQGTIIVPMKDLIDYVWEELMFFRSYFMDAFDQCKEQTRITVILNYIQSAVSQAWSVCDS
LCHDLAREIKCLHFQLLLKFKFIKVAIRQMCPSISASSTPDHPMIDLLNFLPMNFEAIDS
YSSMLKASYPSSSHRPNRDAESPNTSFLYGPNTDVYTFYSSSSHIPKMDEILKRFHEYIL
VNLLRKDETNLTFTVADEVKKFYDGLLLMVTYLIEPPVPHTECRKQNDLSMGHEAVAIEA
ESAVCLHYEDNMNNNRCREINQVLQFLTVTFWLIKSEGNLMVLLKHKSTLGNQVLDLIES
AHEELILLRSILMDLLRKKLYRLDDLLMHAEVTAKRLAIFSGSCYENFMNGSSTEKMRPL
LSDFLQEIESVKVEFRNVCLQVLDVSPFSLTDGEGLVNFLLKNQAKVPNDDAVSSDGSLE
DASSTEKMGLPSDFLREIESVEIKEARKLYDQVLDATHCETSKTDGKSFINIMLTQQDKV
LDYDAGSVSYLLNQISVVKDKLLHIGSLLVDIVQYRNMHIELTDLAERVQDKNYICFFSI
KGYIPAWYYTLYLSDVKQLLKFVEAEVKIICLKVPDSSSYSFPKTNGLGYLNCFLGKLEE
LLRSKLDLIIDLKHQIESVKEGLLCLRSFIDHFSESYDEHDEACGLTTSVSVMAYKAEYV
IDSCLAYSHPLWYKVLWISEVFENIKLVNKVVGETCQRRNIEVTVHEVAKTTTNVAPSFS
AYTQRANEEMEGFQDTMDELKDKLLGGSPELDVISIVGMPGLGKTTLAKKIYNDPEVTSR
FDVHAQCVVTQLYSWRELLLTILNDVLEPSDRNEKEDGEIADELRRFLLTKRFLILIDDV
WDYKVWDNLCMCFSDVSNRSRIILTTRLNDVAEYVKCESDPHHLRLFRDDESWTLLQKEV
FQGESCPPDLKDVGFEISKSCRGLPLSVVLVAGVLKQKKKTLVAWKVVEQSLSSQRIGSL
EESISIIGFSYKNLPHYLKPCFLYFGGFLQGKDIHVSKMTKLWVAEGFVQANNEKGQEDT
AQGFLDDLIRRNLVMAMEKRPNAKVKTCRIHDLLHKFCMEKAKQEDFLLQINSGEGVFPE
RLEEYRLFVHSYQDEIDLWRPSRSNVRSLLFNAIDPDNLLWPRDISFIFESFKLVKVLDL
ESFNIGGTFPTEIQYLIQMKYFAAQTDANSIPSSIAKLENLETFVVRGLGGEMILPCSLL
KMVKLRHIHVNDRVSFGLHENMDVLTGNSQLPNLETFSTPRLFYGKDAEKILRKMPKLRK
LSCIFSGTFGYSRKLKGRCVRFPRLDFLSHLESLKLVSNSYPAKLPHKFNFPSQLRELTL
SKFRLPWTQISIIAELPNLVILKLLLRAFEGDHWEVKDSEFLELKYLKLDNLKVVQWSVS
DDAFPKLEHLVLTKCKHLEKIPSRFEDAVCLNRVEVNWCNWDVANSAQDIQTMQHEVIAN
DSFTVTIQPPDWSKEQPLDS
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggagtgtcgcgatgcaataggtactataaaccttgtgaagggccagcattta
gacagaaggaccactgatcaattggaggatgctataaagcacctaacacatgttgctgta
tttctcacaaatctggagaagcgtcaccctgctaatggaatatctggacatcttaggcct
ctatttttagaagctcatgatggcttttctctgatgtgttctcatcctcctcgttctcag
tttaccgttaaactggagaacattgctgagaaattcaaatcttcaaaggcgtcaagatca
acaaggcaagtgatcccagagctgctgcaaataattgaacccgagaatattgctaagcga
atcaaagcttcaaagccatcaagatcatctagcccaatcactgtggatatggtggggttt
atcgaatccttgcttggttctgttcatcgtgcattgttctttatcagtgcagggcctcct
gtgtctatgcttgacaagaagcttcgacatctacaagtcttctttacactaatttcaaag
cggggcattgagcatgagagtatgaaggatctcttctaccatgttgaggatgtagcttac
actgcagcacaactatgtgtcttggggtcaagctgccatatggatgacgagttctctaaa
ttgctggaaaggataagtcgtccttttagcccaggattgaggcaggtttatctcaatgcc
ttgatagggttaaattcatcaagatcaaagactacaatgaatgccaaatatatgcttgat
tttgttagtgctctccaagatgatctgagactaagatgtgataatcgaattcgatggctc
caacgaggactttcttacctttgtcgattcctcagggacatagaatcttatcctgtttca
catcgacaactgatttctcttcaattgaatatggaatatctggctattgggtctgcaaat
gccatctactcctttgatgaggatatggataagactagtgaaatagaccatgagcttttt
catttgcaaatgaagtttaattatgttaaagtggaggttgatctgattcgtctacaaaac
attcaaggcaccataatagttcctatgaaagatctgattgactatgtttgggaagagctg
atgttctttagaagttatttcatggatgcgttcgaccagtgtaaagagcagaccaggata
actgttattttgaactatattcagtctgcagttagtcaagcatggtcagtctgtgattct
ctttgtcatgacttggccagggaaattaagtgcttgcattttcaattgcttcttaagttc
aagtttatcaaggtcgctattagacagatgtgtcccagcatttctgcatcatcaacacca
gaccatcctatgatagatctgctgaactttcttcccatgaactttgaggccattgattcc
tattccagcatgctaaaagcctcctatccatcttcctcacatcgtcccaatagggatgcg
gaatcccccaatacatcattcttatatggtcccaatacagatgtgtacaccttctattca
tcatcctcacatattcccaagatggatgagatattgaagaggtttcatgaatatattctt
gtcaatctgctacggaaggatgaaaccaatttgacatttactgttgcagatgaggtcaaa
aagttttatgatgggttgttgctcatggttacatatcttattgaacctccagttcctcac
actgaatgcaggaagcaaaatgatctctcaatgggacatgaagctgttgcaattgaggcg
gaatctgctgtgtgtttacattatgaggataatatgaataacaacaggtgtagggagatc
aatcaggtacttcagtttttgactgtgactttctggcttatcaagtctgagggtaacttg
atggttctactgaagcacaaatccactttgggaaatcaagttctagatctgattgagagt
gctcatgaagagcttattctccttagatctattctcatggatcttcttaggaaaaagctt
tacagattggatgatctcttaatgcatgctgaagtgactgcaaaaaggttagcaatattc
agtggttcttgttatgaaaatttcatgaacggaagcagcactgagaaaatgaggcccttg
ttatctgattttctgcaagagattgagtctgtcaaggtagagttcagaaatgtttgcttg
caagttctggatgtatcacctttttccctgacagatggagaaggccttgttaatttctta
ttaaaaaaccaggccaaggtgccgaatgatgatgctgtttcttctgatggaagtttagag
gatgcaagcagcactgagaaaatgggacttccatctgattttctccgagagattgagtct
gttgagataaaggaggccagaaaattatatgatcaagttttggatgcaacacattgtgag
acgagtaagacagatggaaaaagctttatcaacattatgttaacccaacaggacaaggtg
ctggactatgatgctggttcagtctcttatcttcttaaccaaatctcagtagttaaagac
aaactattgcacattggctctttacttgtagatattgtacagtacaggaatatgcatata
gaacttacagatctcgctgaacgtgttcaagataaaaactacatttgtttcttctctatc
aagggttatattcctgcttggtattacacactatatctctctgatgtcaagcaattgctt
aagtttgttgaggcagaggtaaagattatttgtctgaaagtaccagattcttcaagttat
agcttccctaagacaaatggattaggatatctcaattgctttttgggaaaattggaggag
cttttacgttctaagctcgatttgataatcgacttaaaacatcagattgaatcagtcaag
gagggcttattgtgcctaagatcattcattgatcatttttcagaaagctatgatgagcat
gatgaagcttgtggtcttacaacaagtgtttctgtaatggcatacaaggctgagtatgtc
attgactcatgcttggcctattctcatccactctggtacaaagttctttggatttctgaa
gtttttgagaatattaagcttgtaaataaagttgttggggagacatgtcaaagaaggaac
attgaagtgactgtgcatgaagttgcaaagactaccactaatgtagcaccatctttttca
gcttatactcaaagagcaaacgaagaaatggagggttttcaggatacaatggatgaatta
aaggataaactacttggaggatcacctgagcttgatgtcatctcaatcgttggcatgcca
ggattgggcaagactacactagcaaagaagatttacaatgatccagaagtcacctctcgc
ttcgatgtccatgctcaatgtgttgtgactcaattatattcatggagagagttgttgctc
accattttgaatgatgtgcttgagccttctgatcgcaatgaaaaagaagatggtgaaata
gctgatgagctacgccgatttttgttgaccaagagattcttgattctcattgatgatgtg
tgggactataaagtgtgggacaatctatgtatgtgcttcagtgatgtttcaaataggagt
agaattattctaacaacccgcttgaatgatgtcgccgaatatgtcaaatgtgaaagtgat
ccccatcatcttcgtttattcagagatgatgagagttggacattattacagaaagaagtc
tttcaaggagagagctgtccacctgatcttaaagatgtgggatttgaaatatcaaaaagt
tgtagagggttgcctctctcagttgtgttagtagctggtgttctgaaacagaaaaagaag
acactagtagcatggaaagtagtagaacaaagtctaagttcccagaggattggcagcttg
gaagagagcatatctataattggattcagttacaagaatttaccacactatcttaagcct
tgttttctctattttggaggatttttgcagggaaaggatattcatgtctcaaaaatgacc
aagttgtgggtagctgaagggtttgtacaagcaaacaacgaaaaaggacaagaagatacc
gcacaaggtttcttggacgatcttattcgtaggaatctagtgatggccatggagaagaga
cctaatgccaaggtgaaaacgtgccgcattcatgatttgttgcataaattctgcatggaa
aaggccaaacaagaggatttccttctccaaatcaatagtggagaaggtgtatttcctgaa
cgattggaggaataccgattgttcgttcattcttaccaagatgaaattgatctgtggcgc
ccatctcgctctaatgtccgctctttactattcaatgcaattgatccagataacttgtta
tggccgcgtgatatctccttcatttttgagagcttcaagcttgttaaagtgttggatttg
gaatcattcaacattggtggtacttttcccactgaaatacaatatctaattcagatgaag
tactttgcggcccaaactgatgcaaattcaattccttcatctatagctaagcttgaaaat
cttgagacttttgtcgtaagaggattgggaggagagatgatattaccttgttcacttctg
aagatggtgaaattgaggcatatacatgtaaatgatcgggtttcttttggtttgcatgag
aacatggatgttttaactggtaactcacaattacctaatttggaaaccttttctactcca
cgtctcttttatggtaaagacgcagagaagattttgaggaagatgccaaaattgagaaag
ttgagttgcatattttcagggacatttggttattcaaggaaattgaagggtaggtgtgtt
cgttttcccagattagattttctaagtcaccttgagtccctcaagctggtttcgaacagc
tatccagccaaacttcctcacaagttcaatttcccctcgcaactaagggaattgacttta
tcaaagttccgtctaccttggacccaaatttcgatcattgcagaactgcccaacttggtg
attcttaagttattgctcagagcctttgaaggggatcactgggaagtgaaagattcagag
ttcctagaactcaaatacttaaaactggacaacctcaaagttgtacaatggtccgtctct
gatgatgcttttcctaagcttgaacatttggttttaacgaaatgtaagcatcttgagaaa
atcccttctcgttttgaagatgctgtttgtctaaatagagttgaggtgaactggtgcaac
tgggatgttgccaattcagcccaagatattcaaactatgcaacatgaagttatagcaaat
gattcattcacagttactatacagcctccagattggtctaaagaacagccccttgactct
tag
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integrated database retrieval system
