Solanum pennellii: 107020326
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Entry
107020326 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107020326 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107020326
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107020326
Surveillance factors
Other surveillance factors
107020326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
107020326
NCBI-ProteinID:
XP_015076126
LinkDB
All DBs
Position
5:complement(15106997..15115516)
Genome browser
AA seq
1557 aa
AA seq
DB search
MAEGNLDLPDDLLSSKTSDHSKGNDDNKPFMGQLDISKDQPMVDSSIPLSPQWLYVKPSD
TKMEPRPPSSLSLGSSVDSSQKDAWRTDVPEDKKDWRRTTMETESSRRWREEERETGLLG
RRERRKTDRRAEHDVNNRNSGVDTRRDNKWSSRWGPDDKEKENRTEKRIDVDKEDVHNDG
QTFVANRTVSERESDSRDKWRPRYKMEGNSAAPSSYRAAPGFGQERGKIEGSNVGFNLGR
GRSTGTIIRPSSGGAIGASPFENSVPGKSGISTGIFSYPRGKALDIYRRQKLGSSLCSMP
ENMEEAPPVTQVIAIEPLAFVVPDAEEEAVLNDVWKGKITGGGVSNNSFRKGQSMDNVTE
TGDTEPNNTKIGAPSADVTEETVDGLLKTSIRVEEANTYSFVYENGVRVKFDGGDNHEGQ
KDNHSEVIAADGSLLTRKRADNSDCFKYISGSQFDISMQSLPDSGVTKTPIFENNQHVAF
DGSLKVSDDSNSAFVKSSSEIYWNNLLGRGIPPEELSLYYRDPQGEIQGPFLGADIISWF
DQGFFGMDLLVRLEDAPEDSPFFELCDVMPHLKFEHEHVGNTNLSQAEPSAVLEGKLDPD
LRSSASVSEMVGYAAFDGSSWPPSDFDGIGGHRVQSIPDHPARQFKPAYLHSEDFNNFVA
QDEEIVFPGRPGSVGNAIGKTSTGLTDPSKIHRATPSAICEGGVPDHEETLHPLGLLWSE
LEGTAGKNGPISDVPFRGSGQDQVLNSGAARVGPFGAKTDSTSALETWTDAYRRNAGSEL
NRYHDAMDASRLLHQDHELNRFELADKMFPQQLQQQRPHNLISSHNSHLNEAMMERGTNH
NSIHQPQLASQTGQDLEHFMALQLQQQRQLQLQQLQQQQQFHQQQMLMKEQESHARQLVL
EQLLQRQVHDPSHTQSRLDAIRHSSALEQVLIEQQILSELQQRPHLPPRHAEPSIEHLIQ
AKFGQIPHQGPQNDLMELLSRAKHGQLHPLEHQALQQEQAHERLRQRLEMEEDRQIGAVW
PADETGQYLRNSGVARRANSGFGSLDIYQQQQMPPAEEHVSHLQRNLSMQDRIQRGLYDT
GFLPLERTMSVPGGGPGVNLDAINPLVRAQGLEMQDPNSRMHSAGHMPGFSSGIHLQSPH
RPLFSSQFHAPNVDTIENHWSERNGQLPADWMETRLQQLHLNGERHRRDFDVKRASEDQS
MWMSAGANDDDSSKRLLMELLQQKSGQQSTEQAEITRGILFERGFHSGHFSTTNASNRSF
NPLLDQDTSLNQAFSVGSYGSNSGFPPQRDHVNEIAGSLDACERLPFQSHSGAFAEPEPV
FSSINDASQVHLEARESIVRQAGVATVEGEMPINLLSRHTSLGTGDYNVFKSSSGGSLDS
YNDKNDRRDSATEEIFKERVVVTSKRSDNILPKYPPVLLVSSTQEGLSEIASDGLVRGKN
SSDAMASEVGGRREVGGNAANQVPRAMTSEKKDGRFRRTASCSDADVSETSFSDMLKSNV
KKATAQEAHASEALDATQYARSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggaaatcttgatcttcctgacgatcttctttcctctaagacttctgatcac
tccaaaggtaatgatgacaacaagcctttcatgggccagcttgatatttccaaagatcaa
ccaatggtggacagcagcattcctttgtctccgcagtggctttatgttaaaccaagcgac
acaaagatggaaccacgtccaccaagctctctgtcacttggaagttctgttgattcaagt
cagaaggacgcttggcgtacagatgtacctgaggacaagaaggattggagaagaacgaca
atggagactgagagcagtcgccggtggcgtgaggaagagagggaaactggcttgcttggt
cggagagaacgaaggaaaaccgatcgccgtgctgagcatgatgttaataaccgtaattct
ggggttgatacaaggcgtgataacaagtggtcttctaggtggggtcctgatgacaaggaa
aaagaaaatcgcactgagaaaaggatagatgtagataaggaagatgttcataatgatggc
caaacatttgtggccaaccgtactgtctcagaacgggagtcagattctcgtgacaagtgg
cgtccacgctataaaatggagggcaactctgcagctccaagttcctatcgagctgctcca
ggttttggacaggagagaggaaaaatagaagggtcaaatgtgggatttaacttgggtcgt
gggaggtctactgggactataataagaccttcctctgggggtgcaattggtgcttcacca
tttgagaattctgttcctggaaaatcaggaatctcgactggcatattcagttatccaagg
gggaaagctcttgacatataccgcaggcaaaagcttggctcatctctttgtagcatgcct
gaaaatatggaagaagctcccccagttactcaagtaattgctattgaaccattagctttt
gttgttcctgatgctgaggaggaggctgttctcaatgatgtatggaagggtaaaattact
ggtggtggtgtttctaacaattcctttagaaagggtcaatcaatggataatgtcacagaa
acaggggatacagagcccaacaatactaaaataggtgctccctccgctgatgtcactgaa
gagacagttgatgggttgctgaaaacttcaatacgtgttgaagaagccaatacctatagc
tttgtttacgagaacggtgtcagggtcaagtttgatggaggagataatcatgaaggacag
aaagacaatcattctgaagttatcgccgcagatggaagtttgttgaccaggaagagagct
gataatagtgactgcttcaaatacattagtgggtcccaatttgatatttctatgcagagc
ttaccagattccggagtaaccaagacacctatctttgagaacaatcaacatgttgctttt
gatggcagtttaaaggtgtctgatgattcaaattctgcatttgtgaagtcctcttctgaa
atctattggaacaaccttctaggaaggggtattccaccagaggagttgagtttgtactat
cgtgatcctcagggcgaaatccaggggccatttcttggagctgacatcatttcatggttt
gatcagggattttttggtatggacttgctagttcgcttggaagatgcccctgaagattca
cctttctttgaactttgtgatgtaatgccgcatttgaaatttgaacatgagcatgttggt
aacaccaatctttcccaggcagaaccatctgctgtactagaggggaagttggatcctgat
ttacgtagctcagcttctgtttctgagatggttggatatgctgcctttgatggttcgagc
tggccgccatctgattttgatggcattggtggacatcgtgttcagtcaatacctgatcat
ccagctcgtcaatttaaacctgcatatttacatagtgaagactttaacaattttgttgct
caagatgaagaaattgtgtttccgggaagacctggaagtgttggcaatgctattggaaaa
acttccacaggccttactgatccttcaaagatccaccgtgcaactccaagcgcaatatgt
gagggtggagttccagatcacgaagagacattgcacccacttggtttattatggtcagag
cttgaagggactgcaggaaaaaatggtcctatctctgacgttccttttagaggaagtggc
caggatcaagttctaaactctggtgctgcaagggttgggccatttggtgccaagacggac
tcaacctccgctctggagacgtggactgatgcttatagaagaaatgctggatctgaactc
aacagatatcatgatgctatggatgccagccgcttgttgcaccaggaccatgaattgaac
cggtttgagttggcagacaagatgtttccccaacaacttcagcaacagcgtcctcataat
ttgatatcctctcataatagtcacttaaatgaagctatgatggaacgtggcacaaatcat
aattcaatacaccaaccacagttagcgagtcagactgggcaggatctggaacacttcatg
gcgcttcagctgcaacagcagagacagttgcagcttcaacaactgcagcaacagcaacag
ttccatcaacagcaaatgctaatgaaagaacaagagtctcatgctaggcagctggttctt
gaacaattattgcagagacaagtacatgatccaagtcacacacaatcacgtcttgatgct
attaggcatagcagtgctctggagcaggtgttgatagagcaacaaattctgagtgaactg
caacagcgtccacatcttccaccaagacatgctgaaccatctattgagcatctcattcaa
gcaaagtttggtcaaataccacatcaagggcctcaaaatgatttaatggagctcctatca
cgggcaaaacatggacaattgcaccctttggagcatcaagcccttcaacaagaacaagca
catgagaggttaagacagcgattggaaatggaggaagacagacagattggtgctgtctgg
cctgctgatgaaactggtcagtatctaagaaattcaggtgttgctcgtcgagcaaactct
ggatttggttcattagatatttatcaacagcaacagatgccccctgcagaagagcatgtt
agtcatctgcaaaggaatttgtcaatgcaggatagaattcagcggggtctctatgacact
ggatttctgcctttggaacggacgatgtcagtacctggtggtggtcctggtgttaatttg
gatgccataaatcctctagtgcgcgcacaaggtttagaaatgcaagatccaaattcaaga
atgcactcagctggtcatatgcctggtttctcgtctggcatccacttgcaatctcctcac
cgtcctctattttcaagtcaatttcatgctccaaatgtagatacaattgaaaatcattgg
tccgaaagaaatggtcagttaccagctgattggatggaaactaggctgcagcaactacat
ctcaatggtgagaggcatagaagggattttgatgtcaagagggcttctgaagatcaaagt
atgtggatgtcagctggtgctaatgatgatgacagttcaaagcgattacttatggaactg
ctccagcaaaaatctggtcagcagtcaactgagcaagcagaaattaccagagggattttg
tttgaaaggggctttcactctggtcacttttctacgacaaatgcttcaaaccgttcattc
aaccctcttttggaccaggatacaagtctaaaccaagctttctctgttgggtcatatggt
tctaattcaggttttccaccacagagagatcatgtaaatgagattgccggtagtcttgat
gcttgtgagagattgcccttccaatctcattctggagcttttgctgaacctgaacctgtc
ttttccagcatcaatgacgcctctcaggtacatttggaggctcgcgaaagtatcgttagg
caagctggtgtggcgactgtagaaggggaaatgccaattaacttgctcagcaggcacact
tcacttgggactggagattataatgttttcaaatcatcttcaggtggaagtctcgactcc
tacaatgacaagaatgatagaagggattcagctacggaggaaatttttaaggaacgggtg
gttgtgacatcaaaaaggtcggataacatcttgccgaagtacccacctgtattgctcgtt
tcttcaacccaggagggtctatcggagatagcttctgatggccttgtgagaggcaaaaat
tcttcagatgccatggcttctgaagtagggggtaggagggaagtgggaggtaatgcagca
aatcaagttccccgtgctatgacgtctgaaaagaaagatgggcgttttcgacgaactgca
tcttgtagtgatgctgatgtctcagagacatcattcagtgatatgcttaagagtaatgtt
aagaaggcaacagctcaggaggcacatgcatcagaggcattggatgcaacacagtatgcc
cgtagtggtaagaagaaaggaaagaaaggaagacaaattgatcctgctcttcttggtttc
aaggttacaagcaatcgcatcatgatgggtgagatacaacggatagaagattag
DBGET
integrated database retrieval system
