Solanum pennellii: 107020342
Help
Entry
107020342 CDS
T04130
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
spen
Solanum pennellii
Pathway
spen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107020342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107020342
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107020342
Membrane trafficking [BR:
spen04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
107020342
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107020342
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107020342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank
BAR
PH
Ank_5
Ank_2
Ank_4
Ank_3
PH_8
PH_11
BAR_2
PH_20
ANK_LRRK2
PH_13
Motif
Other DBs
NCBI-GeneID:
107020342
NCBI-ProteinID:
XP_015076145
LinkDB
All DBs
Position
5:37139030..37150304
Genome browser
AA seq
817 aa
AA seq
DB search
MHFGKLDDSPMFRKQLQCFEESAESLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALET
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQDVKE
ARKRFDKASLIYDQAREKFLSLRKGTKSDVASVLEEELHNARSTFEQARFSLVTALSNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEKAALNEK
MQEYKRQVDRESRWLSNGSNGSPNGDGIQAIGRSSHKQIEAVMQSAARGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQNTKPSGSGSQHSGQRNSSELGSGLLSRWLSS
HYHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKSYTLQAESALDQMDWI
EKITGVIASLLSSQAPDRCLTASPMGSGHHRSASESSSFESSDFDPPAVEDHPSDRLISA
HHDRPFRNSQQLRSAPKSEQPIATLRRVCGNDRCADCGAAEPDWASLNLGVLVCIECSGV
HRNLGVHISKVRSLTLDVKVWEPSVIALFQSLGNTFANSVWEESLQARGAFQVNVSAASS
YRSDKQQQLYISKPSHADPISTKEKFIHAKYADKSFVRRTKDGHTVAQMMWEAVRANDKK
AVYRLIVSSEADVNALYKQVVSNSSLTLAKVMLLQELPYTDQSSTCLEMDLASPSERLIV
GDFDGCSLLHLACQTADLGMLELLMQYGANVNASDSSGQTPLHWCIIRGKAAFAKLLIAR
GADPHALDGESKTPYDLALGSNFDDVDVLNLLSDTNA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcattttggtaaactcgatgactctcccatgttccgtaaacagctgcaatgttttgaa
gaaagtgctgaatcactaagagaaagaagcttgaaattttataaaggatgtcgaaaatat
acggagggacttggagagggatatgatggagatattgctttcgcgagcgccctggaaaca
tttggtggggggcacaatgatcccatcagtgttgcatttggaggccctgtaatgactaaa
tttactattgcactgagggaaatcgggacttataaggaagttcttcggtcacaggttgag
cacatgctgaatgatcgtttactgcagtttgttaacatagatctgcaagatgtcaaggaa
gctcggaagcgctttgacaaggcaagcctaatttatgatcaggcccgcgagaagtttttg
tcactaagaaaaggcacaaaaagtgatgttgccagtgtactggaggaggaacttcataat
gcaagatcaacttttgagcaagctcgattcagtttggtaaccgctctttctaatgtggaa
gcaaagaaacggtttgaattcctggaagcagttagtggtacaatggatgctcatcttcgt
tatttcaaacaggggtatgagcttttgcatcagatggagccatatatcaatcaggtcctg
acttacgcacagcagtctcgagaacgctccaactatgagaaagcagctcttaatgaaaag
atgcaagaatacaagagacaagtagatcgagagagcaggtggttgtccaatggttctaat
ggatcccctaatggagatggtatacaagccattggcagaagttcacacaagcaaatagaa
gctgtcatgcaatctgctgcaaggggaaaggttcaaaccattagacaaggttatctatca
aagcgctcatcaaatttgaggggagactggaaaagaaggttctttgttcttgatagccgt
ggaatgttgtattactatcgcaaacagaacacaaaaccatctgggtcaggtagtcaacat
tctggccagagaaatagttcagagcttggttctggacttcttagtcgctggctttcgtcc
cattatcatggtggtgtacacgatgaaaagtctgttgctcatcacactgtaaaccttttg
acatcaactataaaggttgatgctgaccaatcagatctgcggttttgcttcaggattatc
tcccctacaaagagctacaccttgcaggcagagagtgccttggaccaaatggattggatt
gagaaaataacaggagttattgcttctttgttgagttctcaggcccctgacaggtgtttg
actgccagtcctatgggaagtggtcatcatcgatctgccagtgagagcagttcatttgaa
agttcagattttgacccgcctgcagttgaagaccatccgtctgacaggcttatctcagcg
catcatgatcgccctttcagaaattcacagcagctacgatctgctccaaaaagtgaacag
ccaattgccacactacgtagagtatgcggaaatgatagatgcgctgactgtggtgctgct
gaaccagattgggcatctttaaatcttggtgttcttgtttgtattgaatgttcaggtgtt
catcgtaatcttggtgtgcatatatcaaaggtgaggtcactcacacttgatgtcaaagta
tgggagccttctgttatagctttatttcagtcgttggggaatacctttgcaaattcagtc
tgggaagagtcactgcaagctcgaggtgctttccaagttaatgtttccgctgccagctca
tacagatctgataaacagcaacagctctacatcagcaagccaagtcatgctgatcccatt
tcaaccaaggagaaattcatccatgcaaagtatgcagataaatcatttgttcgtcggacc
aaggatggtcacactgtggcacaaatgatgtgggaggctgttcgagctaatgataagaaa
gctgtgtatcgccttattgtaagctctgaagcagatgttaatgctctttacaagcaagtt
gtgtctaattcttccttaacccttgctaaagtaatgctgttacaagaactaccatacact
gatcagagttcaacttgcttagaaatggacttggcaagtccaagtgagaggcttatagtt
ggggacttcgatgggtgctcccttctacaccttgcttgtcaaacagctgacctagggatg
ctagagcttcttatgcagtacggtgcaaatgtaaatgcttcagattcaagtggtcagaca
ccacttcattggtgcattataagaggcaaagctgcatttgctaagttgcttattgcaagg
ggtgctgatccacatgctttggatggggaaagtaaaaccccttacgatcttgcattgggc
tcaaattttgatgacgttgatgtccttaatctcttgtcagacacaaatgcttaa
DBGET
integrated database retrieval system
