Solanum pennellii: 107020349 Help Entry 107020349         CDS       T04130                                  Name (RefSeq) protein PAT1 homolog 1-like   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism spen  Solanum pennellii Pathway spen03018   RNA degradation Brite KEGG Orthology (KO) [BR:spen00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     107020349  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:spen03019]     107020349 Messenger RNA biogenesis [BR:spen03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      107020349   mRNA degradation factors    5'-3' decay     Decapping complex      107020349 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  107020349 NCBI-ProteinID:  XP_015076157 UniProt:  A0ABM1GUD7 LinkDB All DBs Position 5:complement(18827009..18834857) Genome browser AA seq 820 aa AA seqDB search MERSNSRDFKDLTSSSGSISDGALFDASQYAFFGRDIAEEVELGGLEDGQDNSDLGVGGG LGDDEIQEYHLFEKDEGSVVGSLSDIDDLATTFSKLNRNVTGPRHPGVIGDRGSGSFSRE SSSAADWAKEADFHDWFDQHLSDTECYQESKKWSSQPHISAVLAESKPLYRTSSYPEQPP QPQQLQHYSSEPILLPKSSYTSFPPGGRSQPSPHSLSRQNMSSLSAGPQSPYSSVNLSSL PNSNLHLTGLAHGLHYGSGNIQHLNPTGLSHNSRLQNQWSSHAGLIHGDHSGLLDSVLQH QFPHQNSLLSPQLLSPQQLQQQRLHLSVQPSLAHFSALRSQLYNSFPSPSHLGKYGLADF RDSRSKPSHKVRQNVRFSKQGSDAACHKSESNVPQFRSKYMTGDEIESILKMQHSAAHGN DPYVDDYYHQARLAKKAAESRSKYRFCPNKEQSSRSRNSAESQPHLHVDAQGRVSFSSIR RPRPLLEVDPPGFVCIDSSADQKISERPLEQEPMLAARITIEDGFYLLTEVDDIDRLLQF SQPQDCGAQLKRKRQILLEGMAASLQLVDPLGKGGSSVGLTPKDDIVFLWLVSLPKGRKL MSRYLQLLLPGNELVRIVCMAIFRHLRFLFGGHPPDVGAAETITDLAKVVSKCVTLMDLN SLSACLAAVVCSSEQPPLRPLGSPAGDGASIILKSVLEGATHLLTDSKAASSFSMPNPAL WQASFDAFFGLLTKYCLSKYDSIMQSILAQSQPDAEINCAEAARAVSREMPVELLRASLP HTNDHQKKLLLNFAQRSMPVTGFSSHGGSSGHIDPESVSC NT seq 2463 nt NT seq  +upstreamnt  +downstreamnt atggagagatccaatagcagagatttcaaagacttgactagctcctctggctccatctca gatggtgctctctttgatgcatcacaatatgcattttttgggcgagatatagcggaggaa gttgaattgggtggtttagaggacggacaagacaatagtgatctgggtgttggaggtgga ttaggtgatgacgagatacaggagtatcatttatttgagaaagacgagggatctgtggtg ggctcattatcggacatagatgatctagcaacgacattttcaaagttgaacagaaatgtc actggaccaaggcatcctggtgttattggtgaccgtggatcaggctctttttcaagggaa agttcatctgcagctgattgggcgaaagaagcagactttcatgattggtttgatcagcat ttatctgacactgaatgttaccaggaaagcaaaaaatggtcttcacagccacatatctct gcagtgcttgcagagtcaaaaccattgtatagaacatcctcataccccgagcaaccccca caacctcaacaacttcagcactactctagtgaacccattttactaccgaaatcatcttat acttcttttcctcctggtggtagatctcaaccctcaccacatagcctttcgcgacaaaac atgtcatctctttctgctggacctcagtctccctattcttctgtgaatctctcttcgttg ccgaactctaatctgcatttgacaggcttggctcatgggcttcactatggtagtggaaac atccaacatttgaaccctactggtctttctcataattctaggttgcaaaaccagtggagc agtcatgcaggactcatccatggggaccattctggtctcttagatagtgtcttgcagcat caatttcctcatcaaaacagcttactatctccccagttactgtccccacagcagctccaa cagcagagacttcatctttcagttcagccttctttagctcatttttcagcgctaagatcc caattgtataattccttcccttcaccatctcatctaggtaagtatggattggcagatttc agagattcacgatctaagccatcacacaaggttagacaaaatgtgcgcttttctaaacaa ggctctgatgctgcttgccacaaaagtgaaagtaatgtgccacagttccgatctaagtat atgaccggtgatgaaatagagagcatcctgaaaatgcagcattctgcagcacatggcaat gatccatatgtagatgactactatcaccaggcccgccttgcaaagaaagcagccgagtct aggtcaaaatatcgcttttgtccaaataaggaacagtcttctcggtcacgtaatagtgca gaatcacagcctcatcttcatgttgatgctcaggggcgggtgtcattttcttccatccgc aggcctcgtccacttcttgaagttgatccaccaggctttgtttgcattgacagcagtgct gaccagaagatatctgagagacccttggaacaggagccaatgctggcagctagaattaca atagaagatggtttctatcttctcactgaggtagatgacattgacaggctccttcagttt agtcagccccaagactgtggtgctcagctcaagcggaagcgacagatcctgctggaaggc atggccgcctcacttcaactagttgatccgcttggtaaaggtggaagttctgtcgggctt actcctaaagatgacattgtatttctatggttggtgtctcttcccaagggccggaagctc atgtcaaggtatcttcagcttcttctgcctggcaatgagcttgtcagaatagtttgtatg gcaattttccgccatttgaggtttttgtttggcggtcatccacctgatgttggagcagct gaaaccatcactgatcttgcaaaagtagtctctaaatgtgtcactctcatggaccttaat tcactgagtgcttgtcttgctgctgttgtgtgttcctcagaacaaccacctcttcgccct cttggaagccctgctggagatggagcttctattattttaaaatctgttcttgaaggggcc actcatctattaactgattctaaggctgctagcagtttcagcatgcctaatcctgccctt tggcaggcatcttttgatgccttttttggtttacttacaaagtattgtctgagcaagtat gacagtatcatgcaatcgattctagcacaatcccagccggatgctgaaattaattgtgca gaggctgcaagagcagtaagcagagaaatgcctgtggaacttttacgtgctagtcttcca catacaaatgaccaccaaaagaagctgttgttgaatttcgctcagcggtctatgcctgtt actggattcagttctcatggtggaagcagtggacatatagatcccgaatctgtaagctgt tag

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