Solanum pennellii: 107020413
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Entry
107020413 CDS
T04130
Name
(RefSeq) rRNA methyltransferase 1, mitochondrial isoform X1
KO
K15507
21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107020413
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
Other ribosome biogenesis factors
107020413
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GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-GeneID:
107020413
NCBI-ProteinID:
XP_015076247
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Position
5:complement(25381407..25385191)
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AA seq
460 aa
AA seq
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MLKQFHTPRSLLLFCSTKPLWNLEISMNFSCGVRPKSHQHSITVRSFSTEIAEGSEKSLP
WLGEDKVKQTKRPEKVVVNRSSWGESADKLFKGAEGSVKFKRYEDRRDNYKSTSNSGEED
DEGEMDDPRWDKIKSRFSRIKVRPRSDRPEVRRWNNQDSWGKKTWKEASESTLPRMIGEG
VYGVGPVLAALSAGRREFYGLYIQEGLDLSGNNRKKKDKKGFERVLRTAEKVGLSTKEVS
KHDLNMISDNRPHQGLVLDTSPLEMVGIKELEPVSIEEDTTPLWVALDEVTDPQNLGAII
RSAYFFGASGIVLCAKNSAPLSGVVSKASAGSLELMELRSCKNMMQFLTSSAENGWRVLG
GSVSSRAVPLHEIVPGAPTILVLGSEGTGLRPLVERSCTELVRIPGNIPLDIIAAEDEDA
ESDNSILGQNFRSFMAVESLNVSVAAGPVASTELVEIDNA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacagtttcatacccccagatctttactccttttctgctctactaaacccctt
tggaacttagaaatatctatgaacttttcatgtggggttcgcccgaaatctcaccaacat
tcgattactgttagaagtttttccacggaaattgcagagggtagtgaaaagagtcttcct
tggcttggagaagataaagttaaacaaactaaaagacctgaaaaggtggttgtgaacagg
tcttcttggggggaatcggctgataagttgtttaaaggtgctgagggaagtgtaaaattt
aagagatatgaggatagacgagacaattataagagcacaagtaatagtggagaagaagat
gatgaaggagaaatggatgatccgagatgggataagattaagagcaggttcagtcggatt
aaggtaagaccgaggtctgataggccggaggttagaaggtggaacaatcaagatagttgg
ggtaaaaagacatggaaagaggcttctgagtcaaccctaccgagaatgataggcgagggg
gtttatggtgttggccctgttttagctgcattgtcagctggaagaagggaattttatggt
ctctatattcaggaagggttggatttgagtgggaataacaggaagaagaaggataagaaa
gggtttgagagagttttgaggacagcggagaaagttggattaagtacaaaggaagtatct
aaacatgacctcaatatgattagtgataacaggcctcatcaaggactggtcctcgatact
tctccattggaaatggttggtatcaaggaattggaacctgtttcaatagaggaagataca
actcctctttgggttgctttggatgaggttactgatcctcagaatttgggtgcaattata
cggtctgcttactttttcggagcttctgggattgttttgtgtgctaagaactctgctcca
ttgagtggggtagtgagcaaagcaagtgcaggctcacttgaattaatggagctgaggtct
tgcaagaatatgatgcagttcctaacgtcttcggcagaaaatggatggcgtgtcctaggt
ggttctgtttcttcaagagctgttccattgcatgagattgtgcctggtgctcctacaatc
cttgttttgggaagtgaagggactggtctgagaccattggtggagaggtcatgtactgaa
ttagttagaattccgggaaatatccctttggatataattgctgcagaagatgaggatgct
gagagtgataatagtattttaggtcagaactttagatcctttatggctgtggagagcttg
aatgtaagtgttgcagcaggaccggtagcttcgacagaacttgttgaaattgacaatgca
tga
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