Solanum pennellii: 107020422
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Entry
107020422 CDS
T04130
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spen
Solanum pennellii
Pathway
spen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107020422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107020422
03110 Chaperones and folding catalysts [BR:
spen03110
]
107020422
03029 Mitochondrial biogenesis [BR:
spen03029
]
107020422
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107020422
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
107020422
Messenger RNA biogenesis [BR:
spen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
107020422
Chaperones and folding catalysts [BR:
spen03110
]
Heat shock proteins
HSP60 / Chaperonin
107020422
Mitochondrial biogenesis [BR:
spen03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
107020422
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107020422
Exosomal proteins of other body fluids (saliva and urine)
107020422
Exosomal proteins of breast cancer cells
107020422
Exosomal proteins of colorectal cancer cells
107020422
Exosomal proteins of bladder cancer cells
107020422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
107020422
NCBI-ProteinID:
XP_015076261
UniProt:
A0ABM1GUN4
LinkDB
All DBs
Position
5:75528177..75534289
Genome browser
AA seq
573 aa
AA seq
DB search
MYRFAAKLASKSRVARSSTQQVGSRLNWSRNYAAKDIKFGVEARGIMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDAAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGEIIARAMEQVGKEGVITIQDGKTLLNDLQVVEGMKLDRGYISPYFITNEK
NQKCELDDPLILIHEKKISSINAIVKVLELALKRQRPLLIVSEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAALTGGQVITEELGMNIENVELEMLGKCKKVTISKDD
TVVLDGAGEKKAIEERCEQIRSAIELSTSDYDKEKLQERLARLSGGVAVLKVGGASEVEV
GEKKDRVTDALNATKAAVEEGILPGGGVALLYASKELDSLPTANFDQKIGVQIIQNALKT
PVYTIASNAGVEGSVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVIVELPKDEKAAPAMPGGGMDY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaaacttgcttctaaatccagggttgccagaagcagcacccaa
caggttggtagtaggttgaattggagcagaaactatgctgctaaggatattaaatttgga
gttgaagctaggggaattatgcttcaaggagttgagcagcttgctgatgcagtcaaagtc
actatgggtccaaagggtcgtaatgttgtgattgaacaaagttggggtgcacccaaggtg
acaaaagatggtgtcactgttgcaaaaagcattgaattcaaggacaaaataaaaaatgtt
ggtgccagccttgtaaagcaagttgccaatgccactaatgatgctgctggcgatggtacc
acttgtgcaacagtactcacccgagcaatatttgctgaagggtgcaagtctgtagctgct
ggtatgaatgcaatggatcttagacgaggtatcacaatggctgtcgatgctgttgtaaca
aacctgaaaagcagagcacggatgataagcacatccgaggagattgcccaggttggtaca
atctctgcaaatggagaacgggaaataggtgagataattgcaagggctatggagcaagta
ggaaaggaaggtgtcatcactattcaagatggaaagacactgcttaatgatttgcaagtt
gttgaggggatgaagttggataggggctacatatccccatacttcatcacaaatgagaag
aatcagaaatgtgagctggatgacccacttattcttattcatgagaaaaagatctcaagc
ataaatgctattgtgaaagtgttagaattggctttgaagagacaaaggcccctcctaatt
gtgtccgaagatgtggagagtgaagcactcgctacactcattctgaacaagcttcgtgct
ggaatcaaggtttgcgccataaaagcaccaggatttggtgaaaacaggaaggctaattta
caagatctggctgctttaactggaggccaggtcataaccgaagaacttggaatgaacatt
gaaaatgtggagttggagatgctgggtaaatgcaaaaaggtgaccatctccaaggatgac
actgttgttcttgatggtgcgggtgagaagaaggccatagaggagagatgtgaacagatt
aggtcagcaattgaactgagcacgtctgattatgacaaggagaaattgcaggaaagacta
gctaggctttcagggggcgttgcagtgttgaaggtaggaggagctagtgaagtcgaggtt
ggtgagaagaaagacagagttacagatgctttgaatgccacaaaagctgctgtcgaggaa
ggaattcttccaggtggtggggttgcacttctttacgcatcaaaagaactggactcattg
ccaacagccaactttgaccagaagattggtgttcaaattattcagaatgctctgaagaca
ccagtatatacaattgcctctaatgccggggtggaaggatcagtagtggttggcaaactg
ttggagcaggataacccggatcttggatatgatgctgcaaaaggtgaatatgttgacatg
gtaaaagcaggaatcattgatccattgaaagtaattaggacggccttggttgatgctgct
agtgtgtcgtctttattaactacaactgaagctgttatcgttgagcttcccaaggacgag
aaggcagccccagctatgcctggtggtggtatggactactaa
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