Solanum pennellii: 107020529
Help
Entry
107020529 CDS
T04130
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
spen
Solanum pennellii
Pathway
spen00071
Fatty acid degradation
spen00280
Valine, leucine and isoleucine degradation
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
spen01212
Fatty acid metabolism
Module
spen_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
spen_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
107020529
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
107020529
Enzymes [BR:
spen01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
107020529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
Choline_kinase
Kdo
EcKL
Fructosamin_kin
Motif
Other DBs
NCBI-GeneID:
107020529
NCBI-ProteinID:
XP_015076420
LinkDB
All DBs
Position
5:complement(76263722..76272302)
Genome browser
AA seq
829 aa
AA seq
DB search
MANRTSDLTGRVDPAQSFDIEALLRYASANVNGFPSNISNFTLSQFGHGQSNPTFLIEAR
SGTFAKKYVLRKKPHGKLLASAHAVEREYEVLHALGTHTQVPVPKVFCLCTDSSVIGTPF
YIMEYLEGRIFIDPNLPDVSPKKRRDICRAVSQALASVHSANVDAIGLGNYGKRKDYCKR
QVERWAKQYLLSTGEGKSRRNPKMLELVDWLRQHIPLEDSLGETAGLVHGDFRIDNVVFH
PTEDRVIGILDWELSTLGNQMSDVAYSCLSYFMSISLEDLDESDGFERSSFPEGIPSLPE
YLADYCSAAGRPWPVDQWKFYIAFSLFRGASIFAGIHSRWIMGNASGGERARFAGEKADS
FIKTAWLFIQRKSVLPLHPPSETTREDNIRIFGSESQIQVTPTSGKFVPSEKVQNLRDKL
IKFMEDHIYPRESDFYKLALSTMRWTIHPDEEKLKDLAKREGLWNLWIPFDSAARARELI
FGSGNDSLVENKFNRLLGAGLSNLEYGYLCEIMGRSIWAPQIFNCGAPDTGNMEVLLRYG
NGEQIKEWLVPLLEGKTRSGFAMTEPQVASSDATNIECSIKRHGDSYIINGKKWWTSGAM
DPRCKLLIVMGKTDLTAPKHKQQSMILVDINTPGITIKRPLTVFGFDDAPHGHAEIFFEN
VSVPANNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMQMMVQRALERRAFGKLIA
EHGAFLSDVAKCRIELEKTRLLVLEAADQLDRLGNKKARATIAMAKVAAPNMALMVLDTA
MQVHGAAGVSGDTVLAHLWATARTLRIADGPDEVHLGTIAKTELRKSRL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcggacttcggatcttaccggacgggtcgacccggctcagagtttcgacatt
gaagctcttcttcgctatgcatctgctaatgttaatggattcccttcaaatatctctaat
ttcactctttctcagtttgggcatggacaatcaaatcctacttttctcattgaggctcgt
tcaggaacttttgctaagaaatatgtgttgagaaagaaaccgcatggaaagttgctggca
tctgctcatgctgttgagagagagtatgaggttctacatgcactcggtactcatactcag
gttccagtccccaaagtattttgcttgtgtacagattcaagtgtgattgggactccgttt
tacattatggagtatttggaaggacgtatatttatagacccaaacctacctgatgtatcg
cctaagaaaaggagggatatatgtcgtgcggtttctcaagcgctggcctctgttcactct
gccaatgttgatgcaatcggtttaggtaactacgggaagcggaaagactactgtaagaga
caggtagagcggtgggccaaacaatatcttctatctactggcgagggcaagtccaggaga
aaccctaaaatgttagagctggttgattggttgcgacaacatattccccttgaagattcg
ttaggggaaacagctggtttagtacatggtgactttcggattgacaatgttgtgtttcat
cccacagaggacagagtcataggaattcttgattgggagctgtcgactttgggtaatcag
atgtctgatgttgcttacagctgcttgagctactttatgagtatttcattagaagatcta
gacgagagtgatggctttgagcgcagcagcttccctgaaggaataccttctcttccagaa
taccttgcagattactgctcagctgctggaagaccttggccggttgatcagtggaagttc
tacattgccttttctttgtttcgtggtgcttcaatatttgctggtatacacagcagatgg
atcatgggtaatgcttctggaggtgaacgtgcccggtttgcaggggaaaaggctgattcc
ttcatcaaaactgcatggttatttattcaaagaaaatctgttctcccccttcacccacca
tctgaaacaactagagaggataatatcaggatttttggaagtgaaagccaaattcaagta
acacctacgagtgggaaatttgtgcctagtgagaaggttcaaaatctgagagacaaattg
ataaagttcatggaggatcacatatatccaagggaaagtgacttttacaagcttgcactg
tctaccatgcgctggacaattcacccagatgaggagaagttaaaggatctggcaaaaaga
gaaggcctttggaacctgtggataccgtttgatagtgctgcacgggcaagagaattgatc
tttggcagcggaaatgattccctagttgaaaacaaattcaatcgtttattaggtgctgga
ctttcgaacctcgagtatggatatctttgtgaaattatgggtcgttctatttgggcacca
cagattttcaactgtggggcgcctgatacaggaaatatggaggtattactccggtatggg
aacggggaacagataaaggaatggcttgtccccttgcttgaggggaagacacggtctggc
tttgcaatgacagagccacaagttgcttcctcagatgctactaatatagaatgttccatc
aaaagacatggagactcttatatcatcaatgggaagaagtggtggaccagtggagccatg
gatccgaggtgcaaacttctcattgtgatgggaaaaactgacttaactgctcctaagcat
aaacaacaatccatgatcttggtagacattaatactccaggtattacgataaagagacca
ctgacagtatttggctttgacgatgcacctcatgggcatgcggaaatattttttgagaat
gtatccgtacctgcgaacaatattctactcggtgaggggcgtggctttgagattgcccag
ggtaggctaggtcctggaaggttgcatcattgcatgaggctaataggtgcagccgaacgc
ggcatgcagatgatggttcaacgggctcttgaaagacgagctttcggaaaattaattgcc
gaacacggtgcattcctttcggatgttgccaaatgtcgaattgaactagagaaaaccaga
ttactagttctggaagctgctgatcagcttgaccgcctcggaaacaaaaaggctcgtgct
acaatcgcgatggcaaaggtcgctgcaccaaacatggcattgatggttctcgatactgca
atgcaagtgcacggtgctgctggtgtatccggcgatactgttcttgctcatctctgggct
actgctaggacattgagaattgcagatggtcctgatgaagtacacttgggaacaatcgcg
aaaactgagctaagaaaatcccggctttga
DBGET
integrated database retrieval system
