Solanum pennellii: 107020709
Help
Entry
107020709 CDS
T04130
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
spen
Solanum pennellii
Pathway
spen00450
Selenocompound metabolism
spen00970
Aminoacyl-tRNA biosynthesis
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
107020709
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107020709
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spen01007
]
107020709
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107020709
Enzymes [BR:
spen01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
107020709
Amino acid related enzymes [BR:
spen01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107020709
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107020709
Prokaryotic type
Other AARSs
107020709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
107020709
NCBI-ProteinID:
XP_015076655
UniProt:
A0ABM1GVP1
LinkDB
All DBs
Position
5:complement(76460622..76468282)
Genome browser
AA seq
619 aa
AA seq
DB search
MACRVQHSIQSSFWFLSSTPFRNSLNPRRNFFKNRISFGKELFFSSSSRTALYCTCSSSS
SGGGDKDGFLTYGVGGDDSFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLEKKVIF
ITGTDEHGEKIATAAAANGSSPNEHCDVVSQAYKALWKDLDISYDKFIRTTDPKHEAVVK
EFYSRVLANGDIYRADYEGLYCVNCEEYKDEKDLLDDNCCPTHLKPCVKRKEDNYFFALS
KYQQQLEEVLKQNPGFVQPSYRLNEVQGWIKNGLKDFSISRASVDWGIAVPNDSKQTIYV
WFDALLGYVSALLEDSELASLDTAISSGWPASLHLIGKDILRFHAVYWPAMLMSAGIGLP
KMVFGHGFLTKDGMKMGKSLGNTLEPTDLVQRFGPDAVRYFFLREVEFGNDGDYSEERFI
RMINANLANTIGNLLNRTLGLLKKNCQSTLAVDSDVAAEGNEFKAAVEKLVEKARVHYQN
LELSAACETVLEIGNAGNLYIDGQAPWTLFKQGGEAFETAAKDLVIVLEAMRIISIALSP
ITPGLSLRIYSQLGYSKEQFNAVSWSDTKWGGLKAGQVMAQATPIFARIEDGTEAETKSA
ATKKVKKEKTPKSKSPVEA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtagagttcaacattcaattcagagcagtttttggttcttatcgtcaacccct
tttcgaaattctttgaacccaagaaggaattttttcaagaatcgaattagttttggcaaa
gaattgtttttttcatcttcttcaagaactgccctttactgcacttgcagtagtagtagt
agtggtggtggtgataaagatggttttttgacatatggggttgggggtgatgattcattt
gtacttacaactccactttattatgttaatgctcctcctcatatggggagtgcttatact
accattgctgctgatgccattgctcgttttcagaggctacttgagaagaaagttatattc
atcactggcacagatgaacatggagagaagattgctactgcagctgcagctaatggttct
agcccaaatgaacactgtgacgttgtatcacaagcttataaagctctctggaaagattta
gacataagttatgacaagtttatcagaacaactgatccaaagcatgaagctgttgtgaag
gaattttactctcgggttcttgcaaatggtgacatatacagggctgattatgagggactt
tattgtgtcaactgtgaggagtacaaggacgagaaggatttgctggatgataactgttgt
cctacgcacttaaagccatgtgtgaaaagaaaagaagataattacttctttgccttgtca
aagtatcaacaacaattggaagaagttttaaagcaaaaccctggtttcgtccagccttct
tatcgtctaaatgaggttcaaggttggattaaaaatggcctgaaagatttctccatttcc
cgagcatcagtagattggggtattgctgttcctaatgattcgaagcagactatatatgtc
tggtttgatgctttattgggttatgtatctgcacttctggaggatagcgagctagccagt
ttagatactgcaatttcttctggatggcctgcctcgctccacttaattggcaaggatata
ttgcgatttcacgctgtttattggccagcaatgttaatgtcagcaggaattggtctccct
aagatggtatttggtcatggattcttgaccaaggacggtatgaagatgggtaaatcactg
gggaatacactcgagccaacagacttggttcagaggtttggacctgatgcagtcaggtac
tttttcctcagggaggtagaatttggtaatgacggggactactcagaggaacggttcatc
agaatgataaacgcaaatttagctaatacaattggtaatcttctaaatcgcacacttgga
cttctgaaaaaaaactgccaatcaactctggcggttgattcagatgttgcggcagaagga
aacgaattcaaggctgcagtggagaaactggtagagaaagcacgagtgcactatcaaaat
ttggaattatcagcagcttgcgagactgtgctggagattggtaatgctggaaatttatac
attgatggacaagcaccgtggactcttttcaagcaaggcggcgaagcttttgaaactgca
gcaaaggatctcgtaattgtattagaagcaatgagaatcatatcaatcgcgctatcacca
attacaccaggcttgagcttgaggatatattcccaacttggctactccaaggaacaattc
aatgctgttagctggagtgataccaaatggggcgggctgaaagctggtcaagtaatggca
caggcaacgccaatctttgccagaatagaagatggaactgaagctgagaccaaaagtgca
gcaacaaagaaagttaagaaggagaagacacctaaaagtaagagtcctgttgaagcttag
DBGET
integrated database retrieval system
