Solanum pennellii: 107020791
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Entry
107020791 CDS
T04130
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107020791
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107020791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
CAF1C_H4-bd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
107020791
NCBI-ProteinID:
XP_015076778
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All DBs
Position
5:8296985..8301816
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AA seq
467 aa
AA seq
DB search
MVRRLKKPKNAKRKNKEVEGLSDSVASKVWEAGIDKLEEGEELQCDPSAYNALHAFHIGW
PCMSFDVLRDSLGMVRTEFSHTAYCVAGTQADKRASNSIGIFKLSNISGKRRDLVPTKTG
DDDNMDSESSDSDDDDNEEKEVEAVLQLRKVFHEGCVNRIRAMTQNPHIVASWSDTGHVQ
VWDFSSHLNALAEAESDRSQGASAVSNHSPLFKFGGHKDEGYAIDWSPHVPGRLVSGDCK
NSIHLWEPTSDTTWNVEDSFIGHSASVEDLQWSPVDPCAFASCSVDGSIKIWDTRKKRSP
TATIKAYKTDVNVISWNRGASCMLASGSDDGAFSIQDLRVVKCGLNEGGESVVAYFEYHK
HPITSIEWSPHHEAASTIAVSSSDNQLTIWDLSLERDEEEEAEFKVKMKEQVNVPTDLPP
QLLFIHQGQKDLKELHWHPQIPGMVISTAADGFNILMPSNIENVLPA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagattaaagaagcccaaaaacgctaagcgcaagaataaggaagtggaagga
ttgtcggattcagtagcatcaaaagtatgggaggcaggaatagacaaattggaggaaggt
gaagagcttcagtgtgacccatctgcttacaatgcccttcatgccttccatattggatgg
ccatgcatgagttttgatgtgctgcgggactctcttggcatggtgcgaactgagttttca
catactgcatactgtgtagcaggaacacaagcagacaaaagggcttccaactctattgga
atttttaagttatctaatatatctggaaaaaggcgggacttggtgccaaccaagactggt
gatgatgataatatggacagtgaaagtagtgacagtgatgatgatgataatgaagaaaag
gaagtagaagctgttctacagctacgcaaggtgtttcatgaaggatgtgttaatcgtata
cgtgctatgacgcaaaacccccatatagttgcttcttggagtgatactggtcatgttcag
gtctgggattttagctcacatttaaatgcattggcagaagcagagagtgatcgtagccaa
ggggcttctgcagtctctaatcactcacctttatttaagtttggcggacacaaagatgag
ggctatgctatagattggagtcctcatgtaccagggaggcttgtttcaggggactgcaag
aatagtatccatttatgggagccaacttctgatacaacatggaatgttgaagattctttt
attggacacagcgcaagtgttgaagatcttcagtggagccctgtagatccttgtgcgttt
gcctcttgctcagttgatggaagtattaagatatgggacacccgaaagaaaagatctcct
accgcaactataaaggcatataagacagatgttaatgttatatcatggaacaggggagcg
agctgtatgcttgcatctgggagtgatgacggggctttttctattcaagatcttagagtc
gtcaagtgtggtctgaatgaaggaggagagagtgtcgtggcatactttgaatatcacaaa
catccgatcacttctattgaatggagtcctcaccatgaagctgcctcaaccattgctgtt
tcatcatctgacaatcaactgactatctgggacctttctttggagagagatgaggaagag
gaggctgagttcaaagtcaaaatgaaagagcaagtcaatgtcccaacagatttgccccca
caacttctctttatccatcagggtcagaaagatttgaaagaacttcactggcatcctcag
atccctggaatggttatatccacagcagcagatggatttaacatactaatgccatcaaac
attgaaaatgtgcttcctgcttga
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