Solanum pennellii: 107020881
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Entry
107020881 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107020881
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107020881
Enzymes [BR:
spen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
107020881
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107020881
Prokaryotic type
107020881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
107020881
NCBI-ProteinID:
XP_015076893
LinkDB
All DBs
Position
5:complement(75270617..75275410)
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AA seq
327 aa
AA seq
DB search
MCFSAALALPLLSNLEKNSANCISNCSGKDEDSNKGQSVKLTLPAYKWRLVIAYDGTRFS
GWQYQQSTPTVQCILEEALTKNTKINRKELCVVGASRTDAGVHAWGQVAHFITPFNYGTL
DGVHRAINGLLPSDIRVREFSPAGPEFHARFSVTSKIYCYQVYNSTIMDPFLRHYAYHSE
YKLNADVMRDAAKHFVGKHDFSAFANTSRNDRVPNPVKTILRFDVVEKGPLLRLEVEGSG
FLYRQVRNMVALLLQVGRQAVPPDIVVRILESRDRKELAKYTLLLPPHGLSLETVKYNEE
HLMPPTDSPASSFGRHHSISKCKVLFV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttctcagcagctttggcgcttccattactttcgaatctcgagaaaaattcagca
aattgtatctcaaattgtagtggaaaggatgaagattcaaataagggtcaatcggtgaaa
ctgacattaccagcttataaatggcgattagttattgcttacgacggtaccagattttca
ggatggcagtatcagcagtcgacaccaactgtacagtgcattctggaagaagctctgact
aaaaatacgaaaataaaccgtaaagaactttgtgtagttggtgcgagccggacagatgca
ggagttcatgcatggggtcaggtggcacatttcattacacctttcaactatggaacacta
gacggcgttcatagagctataaatggtcttcttccttctgacatcagagttagagaattt
agccctgcaggacctgagtttcatgcgcgtttctctgtcacaagcaagatatattgctac
caagtatataattccactatcatggacccattcttgaggcactatgcttaccatagtgag
tataaactcaacgctgatgtcatgagagatgccgcaaagcatttcgtggggaaacatgac
ttttctgcctttgccaatacatcgcgaaatgaccgggtgccaaatccagtgaagacgata
ttgcgctttgatgttgttgaaaagggacctcttttgcggttagaagttgaaggttctggt
ttcctatatagacaagttcggaacatggtagctttgttgcttcaagttggacggcaagca
gttccaccagatattgttgttaggattttggaatctcgtgataggaaggaacttgcaaag
tataccttgttacttccacctcatggactcagtctcgagactgtcaagtacaatgaagag
catctcatgcctccaacagattccccagctagtagctttggtaggcaccatagtataagc
aaatgtaaggtgctattcgtttga
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