Solanum pennellii: 107021156
Help
Entry
107021156 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107021156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107021156
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107021156
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107021156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
Motif
Other DBs
NCBI-GeneID:
107021156
NCBI-ProteinID:
XP_015077249
LinkDB
All DBs
Position
6:complement(45140596..45146087)
Genome browser
AA seq
318 aa
AA seq
DB search
MEEMEMDSVECVSLMDGVEDEEIQSSIASHQYPLGKPNNILSAGNVPTSVHELLECPVCT
NSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYFSLG
CPEIFPYYSKLKHETLCNFRPYSCPYAGSECSVTGDIPYLVTHLRDDHKVDMHTGCTFNH
RYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLRFMGDETDARNYSY
SLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRI
WKEQQNPDGGVCIPNLCS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatggaaatggatagcgttgagtgtgtatcattaatggatggtgttgaagat
gaagagatccaatcttctattgcatctcatcaataccctttaggaaagcctaataacatt
ctttctgccggaaatgtccctactagtgtacatgaattgcttgaatgccctgtttgtacg
aattctatgtacccaccaattcaccagtgtcacaatgggcacacactttgttctacctgc
aaaacaagggtgcacaatagatgtccgacatgcagacaagagcttggtgatataaggtgt
ttagcgttagagaaggttgcagagtcacttgaactgccttgcaaatatttttctttgggg
tgcccagaaatattcccatattacagcaaacttaagcatgaaacattgtgcaattttaga
ccttacagttgcccatatgctgggtcagagtgctcagtgactggggacatcccttatttg
gttacacatttaagagatgaccacaaagtggatatgcacacgggatgcacgttcaaccat
cgttatgtgaagtctaatcctcgtgaagtagaaaatgcaacatggatgttgacggtcttc
cattgttttgggcaatatttctgtctccattttgaggccttccagcttggcgtggcccct
gtttatatggcatttttacgattcatgggtgatgaaacggatgcacgtaattacagctac
agtctagaggtaggaggaaatggtagaaaactcatatgggagggtaccccaagaagtatc
cgagatagtcatcgcaaagtcagggacagtcatgacggtcttataatccagcgtaacatg
gcacttttcttttctggtggtgaccggaaagaactgaaacttcgagttactggaaggata
tggaaggaacaacaaaatccagatggtggtgtgtgcataccaaatctatgtagctag
DBGET
integrated database retrieval system
