Solanum pennellii: 107021158
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Entry
107021158 CDS
T04130
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
spen
Solanum pennellii
Pathway
spen04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107021158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107021158
03029 Mitochondrial biogenesis [BR:
spen03029
]
107021158
Membrane trafficking [BR:
spen04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107021158
Atg1 complex
107021158
Mitochondrial biogenesis [BR:
spen03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107021158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
107021158
NCBI-ProteinID:
XP_015077252
UniProt:
A0ABM1GX81
LinkDB
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Position
6:complement(55701492..55705824)
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AA seq
604 aa
AA seq
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MDFQSNLQGGYGRFEQILAQYLLKSLHIILNLRVPSIRAYGGFEEVKRSDKWFNMVLGDR
PAVFENLNLLHGEPMIIDIILVQDKDCTSLKHSSGKAFAGAYTETIIERWVVQCENRRSM
VPQMGDSSYKKMYKKSIILLRSVYSMLKLLPAFKAFRKLSSSSQSCCFDINFKVSSFSEP
FSRAEEEMMKQFTFTSVDAQQGRLSLSVTYRENLVDFNLESSASFPPEIITDYVGSPLTD
PLRSFPLTSTDKGVHNTSFPLRRTQSSCSAPVQRPQSWTSGLFRAPSLPQPYVGSPPLCH
APYELSTSVSNVYGQRIPPNYKYSTHQKTTSFDDDQLSPPFSSSPSPPTYLSGANLVQTH
LRSETDPVSIPHPLIGRTSRHLSPNLSDPNRHYLPPMSPRCTKHDSSSHESPSGIRSSRK
IDLLRVPESDTTNPGQKVPTDARDDSGRFSGVLSSSDSPRVGFSRSSSSRLSFQDDLDDF
DFSCPFIVDDVDTSVSRARENLESRKRPEASSRVSATTRKSQDAAVGALVHMLRTAPPLR
QDSTCYTTHSIEGEVEGETGTASQFYVPRKASDALEELKAYTELKDMLLPKSTTRSDSED
GSYA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagagtaacttacagggtgggtatggaagatttgagcaaatacttgctcaa
tatcttctaaaaagcttgcatattattttgaacttgagggttccttcgataagagcgtat
ggtgggtttgaagaagtgaagaggagtgacaagtggtttaatatggtgttgggagatcgt
cctgcggtttttgaaaacttgaatctgttgcatggggagccaatgataatagatataata
cttgttcaagataaagattgtacttcattgaagcacagttcaggtaaagcatttgcaggg
gcatatacagaaaccattatagagaggtgggtcgtgcaatgtgagaatcggaggtcaatg
gttcctcaaatgggtgattcctcttacaagaaaatgtacaagaagtctatcatactactt
cgttccgtttattcgatgttgaagctcctgcctgcattcaaggccttcaggaaactatct
tcgtcaagtcagagttgttgttttgatattaattttaaggtatcttcatttagtgagcca
ttctcaagggcagaggaggagatgatgaaacaatttacttttacttcagttgatgcccag
caaggccgtctttccttatctgtgacatatcgtgaaaatctggtggactttaacctggag
agttctgcatcctttccacctgagatcattacagattatgttggtagtccactcactgat
cctctgaggtcattccctttgacctcgacagataagggtgttcataatacttcatttcca
ttgagaaggacacagtcctcttgttcagcacctgttcagcgcccgcagagttggacaagt
ggtctcttcagggcaccttctttacctcagccgtatgtaggatctccacctttatgccat
gcaccatatgagctttcaacttcagtcagtaatgtatatggacagaggattccacctaac
tacaaatattcgactcaccagaaaacaactagttttgatgatgaccagctttcccctcca
ttttcatcatcaccatctccacccacatatctttcaggtgcaaatcttgtgcagactcat
ttgcgttcagaaactgatcctgtcagtatccctcatccattaataggcagaacttccaga
cacctatctcctaatttgtctgatccaaacaggcattatctcccacctatgtcacctaga
tgcacaaagcatgattcttcatcccatgaatccccttctggaatcagatcatcaaggaaa
atagatttgctaagggttccagagtcagatactactaatcctggacaaaaggtgcctaca
gatgctagagatgattcaggacggttctcaggtgtgctctcttcaagtgattcaccacgt
gttggattttctagaagttctagcagcagattatcttttcaggatgacttggatgacttt
gatttttcctgtccttttatagttgatgatgttgatacttctgtttcccgagccagagag
aaccttgaatccagaaagcgcccagaagcctcgtctagagtatctgcaacaaccagaaaa
tctcaagatgctgctgtaggtgcccttgttcacatgttgagaactgctcctccgttgcgt
caagattctacttgctatactacacattctatagagggagaggtagagggagaaactggc
actgcatctcagttctatgttcctaggaaggcatcagatgcattggaggagctcaaagct
tacactgaattgaaagatatgttacttcccaagagcacgacacgctcagacagtgaggat
gggagctatgcgtga
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