Solanum pennellii: 107021185
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Entry
107021185 CDS
T04130
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107021185
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107021185
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107021185
03019 Messenger RNA biogenesis [BR:
spen03019
]
107021185
03041 Spliceosome [BR:
spen03041
]
107021185
Enzymes [BR:
spen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107021185
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
107021185
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107021185
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107021185
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107021185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Tnp_22_dsRBD
Motif
Other DBs
NCBI-GeneID:
107021185
NCBI-ProteinID:
XP_015077282
LinkDB
All DBs
Position
6:23242179..23251624
Genome browser
AA seq
304 aa
AA seq
DB search
MDPAAVDRIIEKLLEVRLSKPGKLVQLSESEIKQLCVSSRDIFVKQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFYDECKRRFNVKLWKSFTDCFNCLPVAALIDEKILCMHGGLSPDLSSL
DQIRNLPRPTAIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLSKHDLDL
VCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMGVDENLMCSFQILKPAEKKN
KFMM
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgcagctgtcgataggattattgagaagctattagaagttcgattatcgaag
cctggcaagttggtgcagctttccgagtctgaaatcaagcaactatgtgtttcctctaga
gatatcttcgttaaacagccaaatctacttgaacttgaagcacccatcaaaatttgcggt
gacattcatgggcagtacagtgatctgttgaggctttttgaatatggtggttttcctccg
aaggctaactacttattcttgggtgattatgtagatcgtgggaagcagagcttggaaaca
atatgcctcttgcttgcctataagatcaagtatcctgagaactttttcttgcttagagga
aaccatgaatgtgcttctataaataggatatatggattctatgatgagtgtaagcgtcgg
ttcaatgtgaaactatggaagtcctttacagactgttttaattgtcttcctgtagcagca
cttatcgatgagaagatattatgcatgcatgggggtctgtcccctgatctttctagtttg
gatcagattcggaacttaccacgtccaactgccatcccggacactggtttgctttgcgat
ttactttggtcagatcctggtaaagatgtaaagggttgggggatgaatgataggggagtt
tcatacacctttggtcctgataaagtttctgagtttttgtcaaagcatgacttggacctt
gtctgtcgtgcccatcaggtcgtggaggatggttatgaattctttgctgacaggcagctt
gtcaccattttttcagctcccaattactgcggcgagtttgacaatgccggtgctatgatg
ggtgttgatgaaaacttgatgtgctctttccaaattcttaagccagcagagaagaaaaat
aagtttatgatgtga
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