Solanum pennellii: 107021222
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Entry
107021222 CDS
T04130
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
spen
Solanum pennellii
Pathway
spen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107021222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107021222
03400 DNA repair and recombination proteins [BR:
spen03400
]
107021222
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107021222
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107021222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
107021222
NCBI-ProteinID:
XP_015077321
LinkDB
All DBs
Position
6:complement(3776638..3785463)
Genome browser
AA seq
1305 aa
AA seq
DB search
MTQDMLYEDSSKIFVGVRFVLIGFDPHRKEQIQSKLVEGGGVDAGKYGPDCTHLIVDSII
YDDPICVSARRVGKIVVTSLWVAHSFDLGMPVDHHSVMYRPPRNLNGIPGAKSLIVCLTG
YQRQDRDDIMTMVGLMGANFSKPLVANKVTHLVCYKFEGEKYELAKKMKTIKLVNHQWLE
DCLKSWEILSEAEYDKSGYELEMMEAEAKDSEDENEGIAANRSAETIAIMGPENPKSPNR
FLVKQEASTNISDLNTSRGSSVLGNTKELSLSASKQSKSDQVPAFEESPNRHDEMLNSNF
CRTKEEPPSSMQQNGSDLVSVSNSARKSPHSCSSREFPRKFSSPMTSEHMKSYSGSPAAT
EAGIGFDCFNLSSQKGLEKSELGVTTPKNLSFSGKGQSSKLPEKRNMGISDSSFKSPRAG
NIFVSIPDGYLTSNHSEELINSSKLHSLSHKGSHLLSRNPAPHLDKGVTLETMQHYDSTI
SNPATLSTGQGHDEDAPQSSTYMIVGSKETSHAAVDVSGPLDERHDVPSPVNERRDTLKS
NVLAEFNKAGDDSMSGSKTLKKRSLSKKTLGSRQSLGKGDGRNQKGSLLINKTVLTNDSA
ASSSGGREETEHQNILSSKKGEVLPADNADPSKEIERNNFLNSEKESAKTNESLNDDTEA
PEDQEDEELNVLREKFTGTEAQHSGLQSAEKKLNANKVVNKNEREDIAKSLSTESNEFET
QKTSSGKETKLSKSTSVGKASEEKVPEGPKCLKKNSKKTNLATERAAVSVEGALSTESNE
FETQKTSSGKKTKLSKSTSVGKASEEKVPEGPKCLQKNSKKTNLATKRAAVSVEGALSTE
SNEFETQKISSGKETKLSKSTSVGKASEENVPEGPKCMKKNTKKTNLATKRAAASVEDAE
RKKCRTDSNKVEVKKGKGSPSETGKASVISTENQLKSSMDVERENMPVVGLQNASHSEHE
ADRSSPYDTKSRSLKVTEVQSEPRWFIVSGHRLQRKEFQQVIKRLKGKVCRDSHQWSYQA
THFIVPAPVRRTEKFFAAASSGRWILNTDYLTASVEAGKLLDEEPYEWHKKGFTEDLAIN
LEAPRKWRLLRERTGHGALYGMKIIIYGDCIVPPLDTLKRAVKAGDGIILATSPPYSRFL
ESGVDFAIVSEVMPRCDKWVQEFLRHEIPCVLPDYLVTYVCKPGYTLSNYVQYNTHSWAE
RSLKKHVNRLEEIVEEMEPSDDSSNDIACQVCGSPDRGEVMLICGDESGSLGCGIGMHVD
CCDPPLECIPEEDWFCPECSKNMSNTSTKRKSKKGTSTSKKKKKK
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagatatgttgtacgaagacagctccaagattttcgttggtgttcgttttgtt
ctaattggattcgacccccatagaaaggaacagattcagtccaagctcgtggagggtggc
ggagttgatgcaggcaaatatggaccagattgcacccatcttattgttgatagtattatc
tacgatgaccccatatgtgtttctgcacgacgggttggaaaaatagttgttaccagcttg
tgggttgcacacagttttgatttgggaatgcctgtcgatcaccattctgtcatgtacaga
cctccaagaaatttgaatggaattccaggtgctaaatcactgatagtctgcttaactggg
tatcaacggcaagatcgagatgatattatgacaatggtgggattgatgggtgcaaacttt
tcaaagccgttggtggcaaacaaagtcactcatcttgtatgctacaaatttgagggggag
aaatatgaacttgccaagaaaatgaagacgattaagcttgttaatcaccagtggttggag
gattgtttaaagtcttgggaaatcctttcagaagcagagtatgataagagtgggtatgag
ttggagatgatggaagctgaagccaaagattctgaagatgaaaatgagggcattgctgca
aacaggtctgcagaaacaatagctatcatgggtcctgaaaatccaaaaagtcctaatcga
ttccttgtgaagcaggaagcctctacaaacatttcagacttaaacacatctagaggctcg
tcagttcttgggaacacaaaagagctgtcattatctgcttcaaagcagtcaaaatctgac
caggttccagcttttgaagaatctccgaataggcatgatgaaatgcttaattccaacttc
tgtagaacaaaagaagagccaccatctagcatgcaacaaaatggaagtgatttggtttct
gtttcaaatagtgccaggaagtctcctcattcttgttcgtccagagaattcccaaggaaa
ttcagttctccgatgacctctgaacatatgaagagttattcaggaagtcctgccgctact
gaagcaggtatagggtttgattgctttaacctgtcctctcagaaaggactagaaaaaagt
gagttaggtgtaaccactccaaagaatttgtcgttttctgggaagggtcaaagcagtaaa
ctgcctgagaaaaggaatatgggcatttcagacagtagcttcaagtcaccaagagctggt
aatatttttgtaagcataccagatggttatttgacgtcaaatcattctgaagagttaata
aattcgtcaaagttacatagtctaagccataagggtagtcatctattgtctaggaaccct
gcccctcacttggacaagggtgttactttggaaaccatgcagcattatgattcaaccatt
tccaatcctgcgacactaagcactgggcaagggcatgatgaggatgccccgcaaagcagc
acttatatgatcgtcgggtcgaaagagactagtcatgctgctgttgatgtcagtgggcca
ctggatgaacggcatgatgtcccatctccagttaatgaaagaagagataccctgaagtct
aatgtgctggctgagttcaataaagctggagatgattccatgtcagggtctaagacattg
aagaaaagatcactttccaagaagacactcggatctagacaaagtctcggtaaaggggat
ggcagaaatcagaaaggttctttactcattaacaagactgttctgacgaatgattcagct
gcttccagtagtggagggagagaggagacagaacaccaaaatatcttgagctctaaaaag
ggtgaggttctgcctgcagataatgctgatccgagcaaggagatcgagagaaataatttt
ttgaattctgaaaaagaatctgccaaaacaaatgaatccctaaatgatgatactgaggct
ccagaggaccaagaagatgaagaattaaatgttctaagagagaagtttactggtactgaa
gcacaacattcagggcttcaatctgcggagaagaaattaaatgcaaacaaggtggtaaat
aagaatgaaagggaggatattgcaaagagtcttagtactgaaagcaatgaatttgaaact
caaaagacttcttctgggaaggagaccaagttaagtaagtcaacttctgtggggaaagct
tcagaggagaaagttcccgaaggtccaaaatgtctgaagaagaatagcaagaaaactaat
ctagctaccgaaagagctgctgtttctgtagaaggcgctcttagtactgaaagcaatgaa
tttgaaactcaaaagacttcttctgggaagaagaccaagttaagtaagtcaacttctgtg
gggaaagcttcagaggagaaagttcctgaaggtccaaaatgtctgcagaagaatagcaag
aaaactaatctagctaccaaaagagctgctgtttctgtagaaggcgctcttagtactgaa
agcaatgaatttgaaactcaaaagatttcttctggcaaggagaccaaattaagtaagtca
acttctgtggggaaagcttcagaggagaatgttcccgaaggtccaaaatgcatgaagaag
aataccaagaaaactaatctagctactaaaagagctgctgcttctgtagaagacgcagaa
aggaagaagtgcagaactgatagtaacaaagtagaagtaaagaaaggaaaagggtctcca
tctgaaactggaaaagcctcagtaatttcgactgagaatcaattgaagagctccatggat
gtggagagggagaatatgcctgttgttggactccagaatgcgagtcatagtgaacatgaa
gctgacagaagttctccttatgatacaaagtctcgttccttgaaggttacagaagtacaa
agtgagcctaggtggtttatagttagtggacatcggctacaaaggaaggagtttcagcag
gttatcaagcgattgaaagggaaagtgtgcagagattctcaccagtggtcatatcaggca
acccatttcattgttcctgccccagtacgaagaacagagaagttttttgctgctgcatcc
tctggaaggtggatcttgaatacagattatttaactgcttctgttgaggctggaaaatta
ttagatgaggaaccatatgaatggcacaaaaagggatttactgaagacttagcaatcaac
ttagaggccccaagaaagtggcgacttctgagggagaggactggacatggcgcattatat
ggaatgaagataatcatttatggagactgcattgtaccaccattggatacattgaagcgt
gcagttaaggcaggggatggcattatattagcaacttctcctccttatagtcgattcctt
gagtcaggtgttgactttgccattgtcagtgaggtcatgccacgctgtgacaagtgggtt
caagaattcttaaggcatgagataccttgtgtgttgcctgattacttggtgacttatgtg
tgcaaacctggttataccctcagcaattatgtgcaatacaacactcattcctgggcggaa
agatcactgaaaaaacatgtcaatcgtttggaagagattgttgaggagatggagccatca
gatgacagtagtaatgatatagcatgccaggtgtgtgggtcgcctgacaggggggaagta
atgctgatctgtggtgacgagagtggctctcttggatgtggcattggcatgcatgtagat
tgctgtgatcctccccttgaatgtatacccgaggaagactggttttgcccagagtgtagc
aagaacatgagtaatacaagtaccaaaaggaagtccaaaaaagggacgtctacatcaaag
aagaagaagaagaagtga
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integrated database retrieval system
