KEGG   Solanum pennellii: 107021377
Entry
107021377         CDS       T04130                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spen04121]
    107021377
Enzymes [BR:spen01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107021377
Ubiquitin system [BR:spen04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107021377
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 zf-rbx1 Zn_ribbon_6 zf-RING_10 Prok-RING_4 zf-RING_4 zf-Nse Sina_RING TRAF3_RING zf-RING_6
Other DBs
NCBI-GeneID: 107021377
NCBI-ProteinID: XP_015077509
LinkDB
Position
6:complement(1987689..1992124)
AA seq 215 aa
MSSQESSAQPIRRTRSQSRRNTVLNVDLNAAPPAENRIQEGDPIHVVSGDTPQGRRGASL
TAGAIDVEALDDDVIISSPRAFAAAKNNSRRNQGRVIVLDVDSEDRASRGNSRNRHRRVS
TNQATNNGDNHIDLEGHSCPKRVDLRSAIPAPPKEPTFSCPVCMGPLVEEMSTKCGHIFC
KACIKASIAAQGKCPTCRRKLAVKDTIRVYLPATN
NT seq 648 nt   +upstreamnt  +downstreamnt
atgagttcccaagaaagtagtgcacaaccaattaggcgtacaaggtcccagtcgagaaga
aatactgttctaaatgtggatctaaatgctgcaccgccagctgagaacagaattcaggaa
ggagatcctattcatgttgtgtctggggatacaccacaaggacgaagaggtgcctctttg
acagctggagcaattgatgttgaggcacttgatgatgatgtgattatatcatcccctagg
gcgtttgcagcagctaagaacaactccagaaggaatcaaggacgggttattgtgcttgat
gtggattctgaggaccgtgcttctaggggtaacagtcgcaacaggcatagaagagtctct
acaaatcaagcaacaaacaatggtgataatcacatagacctagaaggacatagctgccca
aagagagttgatcttagaagtgcaataccagcaccaccaaaagagcctacattcagctgt
ccagtgtgcatgggtccattagttgaggagatgtcaacgaaatgtggtcacattttctgc
aaggcgtgcattaaagcatccattgctgctcagggaaaatgtcctacgtgtaggaggaaa
ctggccgtgaaagacaccataagagtatatcttcctgccacaaattaa

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