Solanum pennellii: 107021663
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Entry
107021663 CDS
T04130
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107021663
03036 Chromosome and associated proteins [BR:
spen03036
]
107021663
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107021663
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107021663
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107021663
microRNA pathway
RISC loading complex
107021663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF5575
Motif
Other DBs
NCBI-GeneID:
107021663
NCBI-ProteinID:
XP_015077849
LinkDB
All DBs
Position
6:57116972..57123572
Genome browser
AA seq
1011 aa
AA seq
DB search
MSERGRGRRGGSPYGGGRGGGRTPPYGGGRGDGRTPPYGGGRGGGRTSPSDGRGRGYQSP
GGRGRGTYSSGGSPSYNAPPMYHHQQQSMEVSSMTREVEQKLSLQPSTSANPPARPQPAQ
QSSPPVQPPVATIPAHLAGPSTSTQPPRPPPVSSKSIRPPPRPDYGKLGRKCVVRANHFL
VQVADRDVHHYDVTISPEVLSKKVCRLIIQQLVNNYRLSHLGGRGLAYDGRKSAYTAGAL
PFTSKEFVIIFADDNGGPRREKEFKVSIKFAAKADIHHLKQFLQSRQSDVPQETIQALDV
VLRTNPSAKYEVVGRSLFHHTFAGDAGLLSGGLEYWRGYYQSLRPTQMGLALNIDMSARA
FYESVFVSDYVLRHLNLRDHPQVSLSDQDHSKVRKVLKGVKVEATHQGRRYRITGLTPKS
SSQMMFPVDGTDGMISVDQYFNKKYNIVLAYTKLPAIQCGNSAKPVYLPMEICKIVPGQR
YTKMLNGRQVTEMLRATCQRPKERQNGIQNIVKVNKYADDDLVHEFGIGVDARLTTIEAR
VLNPPTLRFHASGKESRVDPRVGQWNMIDKKMINPAHVYYWTCVSFSQQIPPERLVDGLL
RMCISKGMTFAASLVPFRQARPDHIETTLRDIHRESMQAIDKLGEDLKIKHLQLLLVILP
DGTGQYGRIKRLCEIDLGIVSQCCHPKNLRPPSIAFLENLSLKINVKVGGRNSVLEMAVS
KKMPFLTDKTTIVFGADVTHPQPGEDSSPSIAAVVASMDWPEVAKYRGIVSAQPHRQEII
TDLYTEKEDSKRGVVRGGMIMDLLKAFYAATKIKPERIIFYRDGVSEGQFNQVLLEEMDA
IRKACVALQSDYMPRVTFVVVQKRHHTRLFPSNHDDRTLTDRSGNILPGTVVDTNICHPT
EFDFYLCSHAGIKGTSRPAHYHVLYDENNFTADGIQNVTNYLCYTYVRCTRSVSLVPPAY
YAHLAAFRARYYMENDVDVRSANEGGEGGAAAHFRQLPKIHENVSEVMFYC
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacgtggacgaggacgtcgcggtggttctccttatggtggtggcagaggcggt
ggacgaacacctccttatggtggcggcagaggcgatggtcgaacacctccatatggtggc
ggcagaggcggtggtcgaacatctccttccgatggtcgtggcagaggatatcagtctccc
ggtggtcgtggtcgaggaacttattccagtggtggatcaccgagttacaatgctcctccg
atgtatcatcatcaacaacagtcaatggaggtttcatcgatgactcgggaggttgaacag
aagctttcgcttcaaccttccacatctgcaaatcctcctgctaggcctcagcccgcgcaa
cagtcgtcaccgcctgtacagcctcctgttgctaccatccccgcacatctagcgggaccg
tcgacttcgacgcagccgccaaggccaccaccggtatcatctaaaagcattcggcctcct
cctagaccggattacggaaagctcgggcgtaagtgcgtagtgagggcgaatcactttctc
gttcaggttgctgatcgagatgtacatcactatgatgttacaatcagtcctgaggttctg
tcaaagaaagtgtgccgactgataatccaacagctggttaataactatagactttcacac
ttgggtggaaggggtttagcatatgatggtcgaaagagtgcttacactgctggtgcgctc
ccattcacctccaaggaatttgttatcatttttgctgatgataatggtggaccaaggagg
gaaaaggagtttaaggtctccattaagtttgccgccaaagctgatattcaccatttgaaa
cagttcttgcaaagtaggcagtcagatgtcccgcaagaaacaattcaagctttggatgtg
gtgctgcggacaaacccatcagcaaaatatgaagtagtgggaaggtcgcttttccaccat
acgtttgcaggtgacgctggcttgctttctggtgggttggaatactggagagggtattat
cagagtcttcgaccaactcagatgggccttgctctcaatattgatatgtcagccagagca
ttctatgagtccgtttttgtttctgattacgttttgcggcacctgaatctcagggatcat
cctcaggtgtcgctgtctgatcaggaccattcaaaggttagaaaggttttaaaaggtgtt
aaggtagaagcgactcatcaaggtagacgctacaggatcacagggttgactcctaaatca
tcgtcgcaaatgatgtttcctgttgatggcactgacggaatgatatcggtggatcaatac
ttcaacaagaagtacaacattgtactagcgtatactaagttgcctgcgattcagtgtggc
aacagtgcaaagcctgtatatctgcctatggagatttgcaaaattgttcctggacaaaga
tacacaaaaatgctaaatggcaggcaggtcacagagatgctgagggcaacctgtcagaga
ccaaaagaaaggcaaaatggcattcagaatattgtgaaggtcaacaagtatgctgacgac
gatttggtgcatgaatttggtattggagttgatgcacgcctcaccaccattgaagcacgg
gttcttaatcctccaacgctaaggtttcatgcgtctgggaaagaatcacgagtggatccc
agggttggtcaatggaatatgattgataagaaaatgattaatccggcgcatgtatactat
tggacgtgtgttagcttctcccaacagatcccaccagagaggctcgtcgatggcctgctc
cgtatgtgcattagtaaagggatgaccttcgctgcatcattggtgccgttccgccaagct
cgtcctgatcatattgagacgactcttcgtgatatccatagagaatctatgcaagcgata
gataagttgggggaggatctgaaaataaaacatctccagctgttacttgttattcttcct
gacggtactggacaatatggaaggatcaagcgtctgtgtgaaatagatttgggaattgtt
tcccaatgttgccacccaaagaatttacgacccccatctattgcatttcttgaaaacctc
tctctaaagataaatgtcaaggtgggtggaagaaactctgttttggagatggcagttagt
aagaaaatgcctttcctcaccgataagaccacaattgtcttcggtgctgatgtgacacat
ccgcaaccgggagaagattctagtccctctatagcagctgtggttgcatcaatggattgg
cctgaagttgctaaatataggggtattgtttctgcacagccccataggcaagagatcatt
acggacttgtacacggagaaggaagattctaaaaggggtgttgttcgcggtggaatgata
atggacctgctgaaagcgttttatgccgcgacaaaaattaagcctgagagaataatcttc
tatagagatggagtcagcgaaggacaattcaatcaggttttattggaagaaatggatgcg
atccgcaaggcatgtgttgccctgcaaagtgattatatgccacgagttacctttgtggta
gtgcagaagcgacatcatacacgtctattcccttccaatcatgatgatcgtaccttgaca
gacaggagtggaaacattttgccaggtactgtggtagacaccaacatatgccacccaact
gagtttgatttttacttatgtagccacgctgggatcaagggtaccagtcgtcctgcgcat
taccatgtactgtatgatgagaacaatttcaccgcagatggcattcagaatgtaacgaac
tacctgtgctacacgtacgttaggtgtacacgatcagtttccttagtaccacctgcctac
tatgcacatctagctgcctttcgtgcacgctattacatggagaatgacgtggatgtaaga
tctgctaatgaaggtggtgagggaggagcagcagcacatttcaggcaacttcctaagatt
catgaaaatgtgtcggaggttatgttttactgctga
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