Solanum pennellii: 107022021
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Entry
107022021 CDS
T04130
Name
(RefSeq) elongator complex protein 2 isoform X1
KO
K11374
elongator complex protein 2
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107022021
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
107022021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
EIF3I
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
107022021
NCBI-ProteinID:
XP_015078211
UniProt:
A0ABM1GZL0
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Position
6:2547249..2568077
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AA seq
829 aa
AA seq
DB search
MQNMEVERVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAIFCPKTAQILTTLPGHKASVN
CTLWLPNSKFAFKAKQLEQHLLLSGDAEGVIILWEYSLVDAKWRYVLQVPQVHKKGVTCI
TAIMVSQQEAVFASASSDGTVNVCEVVFPSTHGGDCKLSCSDSLFVGQKPMVALSLAELP
GNSKQLVLAMGGLDNKIHLYCGERNGKFLRACELKAHTDWIRSLDLSLPVYVNGETSLLL
VSSSQDKGIRIWKMTLQDSSASNKKQQTSLASYIKGPVLVAGSSSYQISMESLLIGHEDW
VYSVEWQPPSTSSVEGIEGFQPQSILSASMDKTMLIWQPEKTTGIWMNVVTVGELSHCAL
GFYGGHWSPNADSILAHGYGGSFHLWKNVGIEYDDWKPQKVPSGHFAAVSDIAWARCGEY
MMSVSHDQTTRVFAPWLNNTSIENEESWHEIARPQVHGHDINCVTVIKGKGNHRFVGGAD
EKVARVFESPLSFLKTLSHVTSDNSSFSADIQADVQILGANMSALGLSQKPIYVQAASTP
IDRSNTEGFDTLETVPEAVPVVLTEPPIEEQLAWHTLWPESHKLYGHGNELFSLCCDHDG
KLVASSCKAQSAPVAEIWLWQVGSWKSVGRLRSHSLTVTQMEFSHDNQYLLAVSRDRHFS
VFQINHKGTDEIDYQLVAKQEAHKRIIWSCSWNPFGHEFATGSRDKTVKIWAVGTETSVK
LLLTLPPFKSSVTALSWLSLDNHSNRGLLAVGMENGLIELWNLNSRGGDGHLSVQNASPA
VKFDPFLCHVSTVQRLSWRNPQKSEDSETVQLASCGADHCVRIFRVNVT
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatatggaagtagagagagtttttataggagcaggatgcaacagagtagtgaat
aacgtttcatggggtgcttctggtttagtttcttttggtgcccaaaatgctgttgccatt
ttctgtccaaagacagctcaaatcttgactacactgcctggtcataaagcttctgtgaat
tgtaccctttggcttcccaatagcaagtttgcattcaaagctaagcagctggagcaacat
cttttgctttctggagatgcggaaggtgtaataattttgtgggagtattctcttgtggat
gcgaagtggagatatgtcttacaagtgccacaagtccacaaaaaaggtgttacctgcatc
acggcgatcatggtgtctcagcaagaagctgtttttgcatctgcatcctctgatggcact
gtgaatgtatgcgaagtagtatttccatctactcatggaggtgattgcaaattgtcgtgc
tcggattctctttttgttggtcagaaacctatggttgctctttcactagcagagctccca
gggaatagcaagcagctggttctggccatgggaggattggacaacaaaattcatctatat
tgtggtgagagaaatggaaaatttcttcgtgcttgtgagttaaaggctcatacagactgg
attaggagtttagatctctcattgcctgtgtatgtgaatggtgaaactagtcttctactt
gtaagttcatcccaagacaaaggcattcgcatatggaagatgaccttacaggattcttca
gctagtaacaagaagcagcaaacaagtttggcttcttacattaaaggtcctgttcttgta
gctggctcatcctcttatcagatctctatggaatctctcctcattgggcatgaagattgg
gtatactcagtggaatggcagccgccatcgacttcttctgttgagggaattgagggtttt
cagcctcaaagcattttatctgcatccatggataagacaatgttgatctggcaacctgaa
aagacaactggtatttggatgaatgtagtcaccgttggggaattaagtcactgtgctttg
ggattttatggtggtcactggagtccaaatgcagattctattttagctcatggatatggt
ggatcttttcacctctggaaaaatgttggtattgagtatgatgactggaagccacaaaaa
gttccatctggacactttgctgcagtgtcagacatcgcctgggctagatgtggggaatat
atgatgtctgtcagtcatgatcagacaactagagtatttgctccttggctcaacaataca
agcatagagaatgaggaatcctggcatgaaattgctcgccctcaagttcatggtcatgac
ataaattgtgtcacagtaatcaaaggaaaaggaaatcatcgttttgttggcggggcagac
gagaaagttgcaagagtttttgaatctcctctatcctttctgaagacgctgagccatgta
acatcagacaactctagtttttctgccgacattcaagctgatgtgcagatattaggggca
aatatgtctgctctaggtctatcacagaaacctatttatgttcaggcagcatcgacacca
atagacagaagcaatacggaaggttttgatactctagaaactgttcctgaagcagttcca
gttgtcttgacagagccacctattgaagagcaattggcatggcatactctatggcccgaa
tcacacaaactttatggtcatgggaatgagcttttttctctatgttgtgatcatgatgga
aagcttgtagcttcatcctgcaaggcacaatcagcaccggttgctgaaatatggctttgg
caagttggttcttggaaatccgttggtcgtttacggtctcacagtttaacagtgacccaa
atggagttctctcatgataaccagtatctcttggctgtttcaagagatcgccacttctct
gtttttcaaattaatcataaaggaactgatgagatcgattaccagctcgtagctaagcaa
gaagcacataaaagaataatatggtcatgttcttggaacccatttggtcatgaatttgct
actggttcaagggacaaaactgtcaaaatatgggccgtgggaactgaaacctcggtgaag
ctactgttgacgcttccacctttcaaaagcagcgtcactgccctgtcctggttaagtctc
gataaccatagcaatcgtgggcttcttgcagtgggaatggaaaatggcttgattgaacta
tggaatctgaatagcagaggaggagatgggcatttatcagtccaaaatgcttctcccgct
gtcaagtttgatccatttctatgccacgtctctactgttcaacgactatcttggagaaat
cctcaaaagagcgaagattctgagaccgtgcagcttgcctcctgtggagctgatcattgt
gtgagaatattcagggtaaatgttacctaa
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