Solanum pennellii: 107022037
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Entry
107022037 CDS
T04130
Name
(RefSeq) LEC14B protein-like
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107022037
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107022037
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_Vps41
Beta-prop_IFT140_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
107022037
NCBI-ProteinID:
XP_015078235
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Position
6:3094456..3104218
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AA seq
487 aa
AA seq
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MYFDFLHPESIEDMGYSLSKLEVDTGLFDGSSSNHGVASSVHHDRPTNYLDHEISQLTKL
RSGPHENLSRILPGKKEVPVSAFKMLAAREANISGRGRFSKADCCHVLSKYLPVSGPWIV
DQMETRAYVSQFSADGSLFVAAFQGSHIRIYNVERGWKVHKNIHAKSLRWTVTDTSLSPD
QRHLVYATMSPIVHIVDVGSAASESVANITEIHDGLLLSTDNDDFGIFSVKFSTEGREVV
AGSSDDAIYVYDLEANKLSLRISAHNSDVNSVCFADESGHLIYSGSDDNLCKVWDRRCFR
AKEKPAGVLMGHLEGVTFLDSRGDGRYFISNSKDQSIKLWDIRKMSSHAARNIWFRNYEW
DYRWMDYPAQARDVKHPYDQSISTYKGHSVLRTLIRCYFSPEYSTGQRYIYTGSHDACVY
IYDLVTGEQVAKLQHHRSTIRDCSWHPTYPMLVSSSWDGDVVKWEFPGNGEAPLPPKRKQ
IRRRHFF
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgatttcttacacccagagtccattgaagacatggggtattctctaagtaag
ttagaagtagacaccggactctttgatggttcaagttccaatcacggggttgctagcagt
gttcatcacgacagaccaacaaattatttggaccatgaaatttctcaacttactaagctt
agatcaggaccccatgaaaatctcagtagaatcctaccagggaaaaaggaagttcctgtg
tccgcattcaagatgttagctgctcgagaagccaatatttccggcagaggaaggttttcg
aaggcagattgttgtcatgttctaagtaaatatttgccagttagtggtccttggattgtg
gaccagatggaaaccagagcttatgtatcacaattttcagcagatggttccctttttgtt
gctgcctttcagggaagtcatattagaatatacaatgtggaaagagggtggaaagttcac
aagaatattcatgcaaaaagtttgagatggacagttactgatacatctctttctccggat
caacgtcacttggtgtatgctactatgtcacccatcgtacatattgtagacgtaggatct
gctgcctctgaatctgtagccaacatcacagaaattcatgatggtttgcttttgtctact
gacaatgatgattttggaattttctctgtgaaattttctactgaaggtcgggaagttgtt
gctggaagtagtgatgatgcgatctatgtttatgatcttgaagcaaacaaactctccctt
cgaatatccgcacacaattctgatgtcaattctgtatgttttgctgacgaaagtggccat
ctcatttattcaggaagtgatgacaatctgtgtaaggtctgggatagacgttgttttagg
gccaaagaaaagccagccggagtcttgatgggacacctagaaggcgttacgttccttgat
agtcggggggatggtcgttatttcatttctaacagtaaagatcagtccatcaagctctgg
gatatccgcaaaatgtcttctcatgctgctcgcaatatctggttcaggaattatgagtgg
gactatagatggatggactaccctgctcaagctagagacgtgaagcacccttatgatcag
tcaatatccacttataagggtcattctgtcttgcgtactctaattcgctgctacttctca
ccagaatatagcactgggcagagatacatttacacaggatcccatgatgcctgcgtatac
atctatgatttggtaactggagagcaagtcgcgaaattgcagcaccaccggtcgaccatt
agagattgtagctggcaccctacttatccaatgcttgttagctcttcttgggatggagat
gttgtcaaatgggaattccctggaaatggtgaagcaccactccctccaaaaaggaagcag
atcagaagaaggcatttcttttaa
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