KEGG   Solanum pennellii: 107022037
Entry
107022037         CDS       T04130                                 
Name
(RefSeq) LEC14B protein-like
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spen04121]
    107022037
Ubiquitin system [BR:spen04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107022037
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SCAP Cytochrom_D1 Beta-prop_Vps41 Beta-prop_IFT140_1st WDR54
Other DBs
NCBI-GeneID: 107022037
NCBI-ProteinID: XP_015078235
LinkDB
Position
6:3094456..3104218
AA seq 487 aa
MYFDFLHPESIEDMGYSLSKLEVDTGLFDGSSSNHGVASSVHHDRPTNYLDHEISQLTKL
RSGPHENLSRILPGKKEVPVSAFKMLAAREANISGRGRFSKADCCHVLSKYLPVSGPWIV
DQMETRAYVSQFSADGSLFVAAFQGSHIRIYNVERGWKVHKNIHAKSLRWTVTDTSLSPD
QRHLVYATMSPIVHIVDVGSAASESVANITEIHDGLLLSTDNDDFGIFSVKFSTEGREVV
AGSSDDAIYVYDLEANKLSLRISAHNSDVNSVCFADESGHLIYSGSDDNLCKVWDRRCFR
AKEKPAGVLMGHLEGVTFLDSRGDGRYFISNSKDQSIKLWDIRKMSSHAARNIWFRNYEW
DYRWMDYPAQARDVKHPYDQSISTYKGHSVLRTLIRCYFSPEYSTGQRYIYTGSHDACVY
IYDLVTGEQVAKLQHHRSTIRDCSWHPTYPMLVSSSWDGDVVKWEFPGNGEAPLPPKRKQ
IRRRHFF
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgtattttgatttcttacacccagagtccattgaagacatggggtattctctaagtaag
ttagaagtagacaccggactctttgatggttcaagttccaatcacggggttgctagcagt
gttcatcacgacagaccaacaaattatttggaccatgaaatttctcaacttactaagctt
agatcaggaccccatgaaaatctcagtagaatcctaccagggaaaaaggaagttcctgtg
tccgcattcaagatgttagctgctcgagaagccaatatttccggcagaggaaggttttcg
aaggcagattgttgtcatgttctaagtaaatatttgccagttagtggtccttggattgtg
gaccagatggaaaccagagcttatgtatcacaattttcagcagatggttccctttttgtt
gctgcctttcagggaagtcatattagaatatacaatgtggaaagagggtggaaagttcac
aagaatattcatgcaaaaagtttgagatggacagttactgatacatctctttctccggat
caacgtcacttggtgtatgctactatgtcacccatcgtacatattgtagacgtaggatct
gctgcctctgaatctgtagccaacatcacagaaattcatgatggtttgcttttgtctact
gacaatgatgattttggaattttctctgtgaaattttctactgaaggtcgggaagttgtt
gctggaagtagtgatgatgcgatctatgtttatgatcttgaagcaaacaaactctccctt
cgaatatccgcacacaattctgatgtcaattctgtatgttttgctgacgaaagtggccat
ctcatttattcaggaagtgatgacaatctgtgtaaggtctgggatagacgttgttttagg
gccaaagaaaagccagccggagtcttgatgggacacctagaaggcgttacgttccttgat
agtcggggggatggtcgttatttcatttctaacagtaaagatcagtccatcaagctctgg
gatatccgcaaaatgtcttctcatgctgctcgcaatatctggttcaggaattatgagtgg
gactatagatggatggactaccctgctcaagctagagacgtgaagcacccttatgatcag
tcaatatccacttataagggtcattctgtcttgcgtactctaattcgctgctacttctca
ccagaatatagcactgggcagagatacatttacacaggatcccatgatgcctgcgtatac
atctatgatttggtaactggagagcaagtcgcgaaattgcagcaccaccggtcgaccatt
agagattgtagctggcaccctacttatccaatgcttgttagctcttcttgggatggagat
gttgtcaaatgggaattccctggaaatggtgaagcaccactccctccaaaaaggaagcag
atcagaagaaggcatttcttttaa

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