Solanum pennellii: 107022059
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Entry
107022059 CDS
T04130
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107022059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107022059
Spliceosome [BR:
spen03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
107022059
Complex B
107022059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
107022059
NCBI-ProteinID:
XP_015078267
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Position
6:complement(3075472..3080253)
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AA seq
197 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLGA
FRPVGLPFPQLRPGLPGLPTPPMQMPGNPQMPAGAQWVPGMRPPVLPRPMPGLPGYAPPP
MPQMLAPPGAPMPGQVNNMQRPAGPPSAVPGSMGMPAPTGAPPMFAPPPVYQGSTTVPTN
GGGDNSSTNAQAADSNQ
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgtgactactgtgatacttacttgacacatgattctccttctgtt
agaaagcagcataatgcagggtacaaacacaagggaaacgttcgaacttattatcaacaa
tttgaggcacaactgaatcaaagtctaattgatcaaaaagtcaaggaacatctaggggcc
tttagaccagttggccttccttttcctcagctaaggcctggtcttcctggtcttccaact
cctccaatgcagatgcccggcaaccctcaaatgccagctggtgcccaatgggtccctggt
atgcggcctccggtgcttcctaggcccatgcccggtcttccaggttatgcacctccacca
atgcctcagatgctggcacctcctggtgctcctatgcctggtcaagtcaataatatgcaa
agacctgccggtccaccaagtgcagttccaggaagtatgggaatgcctgctcctactggc
gcccctccaatgtttgcaccacctcccgtgtatcaaggaagtaccactgtgccaacaaac
ggaggaggtgataattccagtaccaacgctcaagctgccgactctaaccaatag
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