Solanum pennellii: 107023062
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Entry
107023062 CDS
T04130
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
spen
Solanum pennellii
Pathway
spen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107023062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107023062
03016 Transfer RNA biogenesis [BR:
spen03016
]
107023062
03012 Translation factors [BR:
spen03012
]
107023062
04131 Membrane trafficking [BR:
spen04131
]
107023062
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107023062
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107023062
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107023062
Translation factors [BR:
spen03012
]
Eukaryotic type
Elongation factors
107023062
Membrane trafficking [BR:
spen04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
107023062
Exosome [BR:
spen04147
]
Exosomal proteins
Proteins found in most exosomes
107023062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
FlpD
SRPRB
Motif
Other DBs
NCBI-GeneID:
107023062
NCBI-ProteinID:
XP_015079096
LinkDB
All DBs
Position
6:4478394..4480873
Genome browser
AA seq
448 aa
AA seq
DB search
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVALNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVVKNVDKKDPTGAKVTKAAQKKGK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagattcacatcagtattgtggtcattggtcatgtcgactctggaaag
tctactaccactggtcacttgatctacaagcttggtggtattgacaagcgtgttattgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaaacttaaggctgaacgtgagcgtggtatcactattgatattgctttatggaagttt
gagaccactaagtactactgcactgtgattgatgcccccggacacagggactttatcaag
aacatgatcactggtacctcccaggctgactgtgctgtcctcattattgactccaccact
ggtggtttcgaagctggtatctcaaaagatggtcagacccgtgaacatgcattgcttgct
ttcacccttggtgtcaagcaaatgatctgctgctgtaacaagatggatgctaccaccccc
aagtactcaaaggctaggtatgatgaaatcgtgaaggaagtttcttcctacctcaagaag
gttggttacaaccctgacaaaatcccatttgttcccatctctggttttgaaggagataat
atgattgagaggtctaccaacctcgactggtacaagggaccaaccctccttgaggctctc
gaccagattaatgagcccaagaggccatcagacaaaccactccgactcccacttcaggat
gtttacaagattggtggtattggaactgtcccagttggtcgtgtagagactggcgtaatc
aagcctggtatggttgtgacctttggccctactggtttgacaactgaagtcaagtctgtt
gagatgcaccacgaagctctccaggaggcgctccctggagacaatgttgggttcaatgtt
aagaatgttgctgttaaggatcttaagcgtggttacgttgccttaaactccaaggatgac
ccagctaagggggcagccagtttcactgcccaggtcatcatcatgaaccatcctggccag
attggaaatggatatgcaccagtgcttgactgccacacttcccacattgctgtcaagttt
gctgagatcttgaccaagattgacaggcgttcaggtaaggaacttgagaaggagcctaag
ttcttgaagaatggtgatgctggtatggttaagatgattcccaccaagcccatggttgtt
gagacctttgccgaatacccaccattgggtcgttttgctgtgagggacatgaggcaaact
gttgctgtgggtgttgtcaagaatgttgacaagaaggacccaactggtgccaaggtcacc
aaggctgcacagaagaagggaaagtag
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