Solanum pennellii: 107023079
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Entry
107023079 CDS
T04130
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
spen
Solanum pennellii
Pathway
spen03010
Ribosome
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
107023079
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107023079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
spen03011
]
107023079
04121 Ubiquitin system [BR:
spen04121
]
107023079
Ribosome [BR:
spen03011
]
Ribosomal proteins
Eukaryotes
Large subunit
107023079
Archaea
107023079
Ubiquitin system [BR:
spen04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
107023079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L40e
ubiquitin
Rad60-SLD
Gamma_PGA_hydro
Cas6
Motif
Other DBs
NCBI-GeneID:
107023079
NCBI-ProteinID:
XP_027773513
LinkDB
All DBs
Position
6:45483361..45485251
Genome browser
AA seq
104 aa
AA seq
DB search
MSRLRFRIRKASLRTSSILIFAGKQLEDGRTLADYNIQKESTLHLVLRLHGGIIEPSLMA
FARKYNQEKMICRKCYARLHPCAVNCRKKKCGHSNQLRPKKKIK
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggctaagattcaggataaggaaggcatccctccggactagcagcattttgata
tttgctggtaagcagcttgaagatggacgtacgctagcagattataatatccaaaaagag
tccactctgcaccttgttctgaggcttcacggtgggattattgaaccttctcttatggct
tttgcccggaaatacaaccaggaaaagatgatttgccgcaaatgctatgcgcgtttgcac
ccttgtgctgtcaattgcaggaaaaagaagtgtggccatagcaaccagttgaggccaaag
aagaagatcaagtaa
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integrated database retrieval system
