Solanum pennellii: 107023087
Help
Entry
107023087 CDS
T04130
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
107023087
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107023087
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
107023087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
AAA_19
DEXQc_Suv3
T2SSE
Motif
Other DBs
NCBI-GeneID:
107023087
NCBI-ProteinID:
XP_015079121
LinkDB
All DBs
Position
6:53799909..53835780
Genome browser
AA seq
2095 aa
AA seq
DB search
MLFQLPRLTNALREPFDADQAYLHRKTILQNLKYRSTATSLEESELARKIVYKWDEGTID
LLRTSPELRQAYKQFIGAVVELMKGEIVSEEFREVAFSVYRLFSGPMVEGEENRRIAEKK
LDLQKLVGYVVSDSLLSRVASLAQILYELQNSHPGIETASLPEVSNGTTDELEFGSDLVF
RPPARFLIDVSLEDSDFFVEQDSAPSSSHETQNEHGSFSNFRESVSGGKFDLSWLRDACD
EIVRGSTSQLPRDELAMAICRVLDSEKPGDEIAGDLLDLVGDGAFETVQDLIMHKKEIVD
AIHHGLIELKADKMTTGGQSRAPSYAVQVTVQTESEKQIDKLRRKEEKKHRRGTNNGVEG
DLSTVSFSSLLHASEKKYIFEDLVGHGEGTNTLGPTALPQGTIRKHYKGYEEVIIPPTPT
ASMKPGERLIDIKELDDFAQAAFHGYKSLNRIQSRIYHTTYNSNENILVCAPTGAGKTNI
AMIAILHEIQHHFRDGYLHKDEFKIIYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDM
QLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVA
RTLRQVESTQSMIRIVGLSATLPNYLEVAQFLRVNSETGLFFFDSSYRPVPLAQQYIGIS
EHNFLARNELLNEICYNKVVDSLKQGHQAMVFVHSRKDTVKTADKLVELSGKSTESELFK
NDEHPQYEILKREVFKSRNKEVVQLFEHGIGIHHAGMLRADRNLTERLFSQGLLKVLVCT
ATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITS
HDKLAYYLRLLTSQLPIESQFINSLKDNLNAEVVLGTVTNVKEACAWLGYTYLFIRMKMN
PLAYGIGWDEVMADPSLSLKQRDLISDAARALDKAKMMRFDEKSGNFYCTELGRIASHFY
IQYTSVETYNEMLSRHMNESELINMVAHSSEFENIVVRDEEQNELEMLARTYCPLEVKGG
PSNKHGKVSILIQLYISRGSIDTFSLISDAAYISASLARIMRALFEICLRRGWCEMSSLM
LDYCKAVDRKIWPHQHPLRQFDKDISSEILRKLEEREADLDHLHEMQEKDIGVLIRYGPG
GKVVKQCLGYFPSVLLTATVSPITRTVLKVDLVIAPQFVWKDRIHGTALRWWILVEDSEN
DHIYHSELFTLTKKMARADPQKLSFTVPIFEPHPPQYYIRAVSDSWLQAEALHTITFHNL
ALPETQTSHTELLDLKPLPVTALGNGTFEALYKFSHFNPIQTQAFHVLYHTDRNILLGAP
TGSGKTISAELAMLHLFNTQPDMKVIYIAPLKAIVRERMTDWRKRLVSQLGKKMVEMTGD
YTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIV
SRMRYISSQTERPVRFVGLSTALANAHNLADWLGVDETGLFNFKPSVRPVPLEVHIQGYP
GKFYCPRMNSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFIS
MPEDSLQMVLSQVTDQNLKHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA
WGVNLPAHLVVIKGTEFYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK
SFYKKFLYEPFPVESSLREQLHDHMNAEIVTGTISHKEDAVHYLTWTYLFRRLMVNPAYY
GLEHAEPGILNSYLSSLVQSTFEDLEDSGCIKITEDSVEPLMLGSIASQYYLKYTTVSMF
GSKIGSDTSLEVFLQILSGASEYDELPVRHNEENYNEKLAEKVPYAVDHNRLDDPHVKAN
LLFQAHFSQSELPISDYVTDLKSVLDQSIRVIQAMIDICANSGWLSSTITCMHLLQMVMQ
GLWFDRDSPLWMLPCMTDDLLNSLQKKGIASIQQLLDCPSESLRAITGSSAASKLYQDMR
HFPRIQVRLKIQPKESNGGKILTLNIRLEDANTQRRTAKAFIPRYPKVKDEAWWLVLCNT
SASELYALKRVSFSGRLQTHMDLPSTLTNFQGIKLILVSDSYIGFEQEHSIEGLT
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaacttcctcgcctgaccaatgctctccgggaaccatttgacgccgatcaa
gcataccttcaccggaaaaccattctgcaaaacctcaagtatcgcagtactgcaacttca
cttgaagaatcagaacttgctcgaaagattgtgtataaatgggacgaaggtactattgat
ttgttaagaacttctcctgagttgcggcaagcctataagcagtttataggcgcggtggtt
gagttgatgaagggtgagattgtgtcagaggagtttagggaggtggcattcagtgtgtat
aggcttttcagtgggccaatggtggagggtgaggaaaacaggcgtattgctgagaagaag
ctagatttgcaaaaacttgttggctacgtagtttcagactcattactatcaagagttgcc
tctttagcacaaatattgtatgagttgcagaatagtcatcctggaattgagaccgcctct
ttaccagaagtgtctaatggaactactgatgaactggaatttggctcggaccttgtgttc
agacctccagctcgttttttaattgatgtttccttggaagattctgatttttttgttgag
caggacagtgcaccttcttcgagtcatgaaacacagaatgaacatggctccttctcaaat
tttagagaatctgtatctggtggaaaatttgatttaagctggttaagagatgcctgtgat
gagattgttagaggaagtacttcacagcttcctcgagatgaactggcaatggccatatgc
cgcgtacttgattcagagaaaccaggggatgagatagctggcgatttgcttgaccttgtt
ggtgatggtgcatttgaaacagttcaggatcttatcatgcacaaaaaggaaattgttgat
gcaatccatcatggactaattgaactgaaagctgacaagatgactacaggcgggcaatca
cgtgctcctagttatgccgtccaggtaaccgttcaaaccgagtctgaaaagcaaattgat
aaacttcgtcgcaaggaagaaaagaagcataggcgaggaacaaataatggggttgagggt
gatttgtccaccgtgagttttagttccttgcttcatgctagtgagaagaaatatatattt
gaggacctcgttggtcatggtgaagggacaaacaccttaggtcctacagcccttcctcaa
ggaactatcagaaaacactacaaaggatatgaagaagtcattatccctccaacaccaact
gcatctatgaaacccggggagagactgattgatattaaggagctagacgactttgcgcaa
gcagcttttcatggctacaagagtctcaatcgtattcagagcagaatttaccatactacg
tacaatagcaacgaaaacatactagtgtgtgcccccactggggctgggaaaacaaacata
gctatgattgctattctacatgagatccaacatcactttagagatggttacttgcataag
gatgaattcaagataatctatgttgctcctatgaaggcattagctgcagaggtcacatca
actttcagtcaccgattgtctccacttaatgtaactgtgagggaacttactggagacatg
cagctttctaagaatgagcttgaggaaacacagatgatagtgacaacacctgaaaagtgg
gatgttattactcggaaaagcagtgacatgtcgctctcaatgctggtgaagctacttatc
attgatgaagtccatttgctaaatgatgatagaggccctgtgatagaagcattagtagcc
cgtacacttcgtcaggtggaatccacacagtctatgataaggatagtgggcctttcagcc
acattacccaactatttggaggttgcacagtttctaagggtgaattcagagacaggctta
tttttcttcgattcgagctaccgtccagtacctcttgcacagcagtatattggtattagt
gagcataactttttagcccggaatgaactgcttaatgagatatgctacaataaggttgtt
gattccctaaaacaagggcaccaggctatggtttttgtccattcacgtaaagacacagtg
aaaactgctgataagctggttgaattgtctggtaaaagtacagagtctgagctgttcaaa
aatgacgagcatcctcaatatgagattttaaagagggaagttttcaagtccagaaataag
gaggtcgttcaactgttcgaacatgggattggcattcatcatgctggaatgttacgtgct
gaccgaaacctaacagagagacttttctctcagggacttttgaaggtccttgtttgcact
gcaactttggcatggggagtcaatttgcctgctcacacagttgtgattaagggaactcaa
atatatgatccaaaagctggtggatggcgagatctgggtatgctggatgttatgcagatc
ttcggacgtgctggaagacctcagtttgataaaagtggtgaaggcattataatcacttca
catgacaagttggcttattatttacggctattgacaagtcaacttcctatagaaagtcag
ttcatcaattccttgaaagataatctaaatgctgaggtggtactgggtactgtaacaaat
gtcaaggaagcttgtgcttggcttggttacacataccttttcattaggatgaagatgaat
cctttggcctatggcatcggatgggatgaggtcatggcagatccatcattaagcttaaag
caaagggatcttataagtgatgctgctcgtgcacttgacaaagcaaaaatgatgcgtttt
gatgagaaaagtgggaacttctactgcactgagcttggtcgtattgcaagccacttttat
atccagtatactagtgttgaaacttacaatgaaatgctgtcacggcatatgaatgaaagc
gagttgataaatatggtagctcattcttctgaattcgaaaatattgttgtccgagatgag
gagcaaaatgagcttgagatgttggctcgcacatattgtccattggaagtcaagggtggt
ccatctaacaaacatggaaaagtttcaattcttattcagctttacatctctcgaggatca
attgacacgttttcgctgatctctgatgctgcttatataagtgcaagcttggctcgtatt
atgcgagctctttttgagatttgtctgcgtagagggtggtgtgagatgtcttctctaatg
ttagactattgcaaggctgtggatcgcaaaatatggccccatcaacatcctcttagacag
tttgataaggacatttcttcagaaatattgaggaaacttgaagaaagggaggcagatttg
gatcatttacacgagatgcaagagaaagatatcggagttttgattcgttatggacctggt
ggaaaggttgttaagcaatgtctcggatatttcccatcagtcctgttgacagctacagtc
agtccaatcactagaacggttctgaaggtggatttggtcatagctccacagtttgtttgg
aaggatcgaattcatggcactgcgttgcgctggtggattctggttgaggattctgagaat
gaccacatttaccattctgagctcttcaccctcacaaagaagatggctagagcggatcca
cagaaactgtcctttactgtgccaatctttgagccacatcctccacagtactacattcgt
gctgtttctgactcgtggctacaagcagaagctttgcacacaataactttccacaacctt
gctcttccagagacccaaacgtcccacactgagcttctagatttgaaaccccttcctgtg
actgcacttggcaatggaacttttgaggccttgtataaattttcacacttcaatcctata
caaacacaggcttttcatgtgctctatcacacggacagaaatatccttttaggagctccg
actggaagtgggaagacaatatcagctgagcttgctatgctccatttattcaatacacag
cccgatatgaaggttatctatatagcacctttaaaggctattgttcgggagagaatgacg
gactggagaaagcgtcttgtttcccaacttggaaagaagatggttgaaatgactggtgac
tacaccccggatctaatggctctcttgtcagcagacatcataatctccactcctgaaaag
tgggatggtattagtcgcaattggcatagtcgaagctatgtcactaaggttgggcttatg
attttggatgagattcatttacttggagctgatcgaggacccatacttgaggttattgtc
tcaaggatgagatatatatcttctcaaacagagcggccagttcggtttgttggcctgtca
acagcattagcaaatgcacataatttggctgattggttgggtgtcgatgaaactggcctc
ttcaatttcaagccaagtgtgaggcctgttcctcttgaagttcatattcagggatatcct
gggaagttctactgcccgaggatgaatagtatgaacaagcccacatatgctgctatatgt
acacattcaccaacaaaaccagttctaatctttgtctcctctcgtcgccaaacaaggctt
acagcactggaccttatccagtttgctgcttcagatgagcacccaaggcagttcataagc
atgccagaagattcacttcagatggttctttctcaagtcacagaccagaacttgaagcac
accttacaatttggaattggattacaccatgccgggctgaatgataaagacagatcattg
gttgaggaactgtttgcaaacaacaagatccaggtgttggtttgtacaagtacgttagca
tggggtgtaaaccttcctgcacatttggttgttattaagggaacagagttttatgatggg
aaagcaaaaagatatgttgatttcccaatcactgatatattacaaatgatgggtcgagct
ggtcgtccacaatatgatcaacatgggaaagctgttattcttgttcatgaacccaagaag
agcttttataaaaagtttctatatgaaccattcccagttgaaagtagcctgagagagcaa
ctgcatgaccacatgaacgctgagattgttactgggacaatctctcataaagaggacgct
gtgcattatctcacttggacctacttgtttcgtagattgatggttaacccagcttattat
ggcctagagcatgcagaacctgggattctaaattcttatttgtctagcttggtgcaaagc
acatttgaggatcttgaagactctggatgcatcaagattaccgaggacagtgttgaacca
ctgatgttgggctcaatagcatctcagtattatctgaagtacaccactgtatcaatgttt
ggctcaaaaataggatctgatacatcacttgaggttttcctacaaatactgtctggtgct
tctgaatatgatgagctcccagtgaggcataatgaggaaaactacaatgaaaaattagct
gagaaagttccgtatgctgtcgaccacaatcgcctggatgatcctcatgtgaaagcaaat
ctgctctttcaggctcatttttcccaatcagagttgccaatcagcgattatgtcacagac
ttaaagtctgtgctggatcaaagtatacgtgttatccaggctatgatagatatttgtgcc
aacagtggatggctctcaagtaccattacctgcatgcatctgttgcaaatggtcatgcag
ggcttgtggtttgatagggactctcctctttggatgttaccatgcatgactgatgatcta
ctcaactcattgcaaaaaaaaggaattgctagtatccagcagctgttggattgcccttca
gaatcattgcgggctatcactggaagttcagctgcctcgaaactgtatcaggatatgcgg
catttccctcggattcaagttcgacttaaaattcagccaaaggaatctaatggtggaaag
attttaaccttgaacattagattggaagatgcaaatactcagcgaagaacagcaaaagct
tttatcccacgatatccaaaggtaaaagatgaagcttggtggttagtcctttgtaatact
tccgcaagtgaactgtatgctctgaagagagtgtctttctctggtcgtttgcagacacac
atggatttgccatccactctgaccaatttccaggggataaagctcattctagtatcggat
tcttacattgggtttgaacaagaacactctattgaaggattgacttaa
DBGET
integrated database retrieval system
