Solanum pennellii: 107023116
Help
Entry
107023116 CDS
T04130
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107023116
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
spen00535
]
107023116
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107023116
Meiosis-specific proteins
Cohesin complex and associated proteins
107023116
Proteoglycans [BR:
spen00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107023116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
Microp_apicomplexa_7
AAA_29
Motif
Other DBs
NCBI-GeneID:
107023116
NCBI-ProteinID:
XP_015079165
LinkDB
All DBs
Position
6:complement(56283804..56303432)
Genome browser
AA seq
1201 aa
AA seq
DB search
MYIKQVIIEGYKSYREQVATEDFSPKVNCVVGANGSGKSNFFHAIRFVVSDLFHNLRSEE
RQALLHEGAGHQVLSAFVEIVFDNSDNRMPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VQNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLNELEQEKEELKKYQQLDKQRKSLEYTIYDKELHDARQKLN
EVEEARNKVAENSTKMYESVLEAHEKSKELEKLSKDLAKEIQILSKEKEAVEKQRTEAIR
KRAKLDLDYKDLQEKMSTNIKAKDDAQKQLMILEREVQETKNALNDIKPLHEKQVKEEED
ITRGIMDREKRLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLSSTLMQEKKLQDEI
DQLKKDMRDQDDIIEVRKVEVDKKETFISGYRNAYNQYKVDRDKLHNERKSLWTQETELT
TEIERLKAEVVKAEKSLDHATPGDIRRGLNSVRRICREYEISGVFGPIFELLECEDKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKKPHVNYPQGSDVIPL
LRKLRFSDSYCRAFEQVFARTVICRNLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLRFMSTIKQNTVSINLKERELEEVRYKLQEIDQKINELVAEQQKNDAGLGHDKS
ELEQLKQDILNAERQKQSILKALQKKEKLLGNILSQIDQLRASIAMKQDEMGTDLVDHLT
PEERDSLSRLNPEITALKEQLIACRANRIETETRKEELEMNLSTNLERRKQELMAMNSSV
DVDMLQAEVESKYQELKDADSLVDHVTKELTRVSRNIDERNKRLKQIKQEKDNLKALEDK
YQNTLQDEARELEQMLSKRNTYLAKQEEYSKKIRELGPLSSDAFETYKRRNVKELYKMLH
KCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEEDDNDPDDDEPRADAEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMVRDLADRGSTQFITTTFRPELVKVADKIYSVSHKNRVSKVTVVSREGALDFIEQDQSH
N
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggtcatcattgaagggtataagagttatcgagaacaagtagccact
gaagatttcagtccaaaagttaactgtgttgttggtgcaaatggatctggcaagtctaac
tttttccatgcaatccgttttgtcgtaagcgacctctttcacaatttgcgcagtgaagaa
agacaggctttgcttcatgaaggagcaggtcaccaagtgttatctgcttttgtggaaatt
gtatttgataattcagacaatcgaatgccggttgataaggaggaagtacggctgagaaga
acaatcggtctcaagaaggatgaatatttcttggatggaaaacatatcacgaagacagaa
gtccagaatttgctggaaagtgctgggttttctcggtctaatccttattatgttgtgcag
cagggaaagatagcatcattgacattaatgaaggattcagaacgacttgatctactgaag
gaaattggagggacacgtgtttatgaggagaggcgtcgagaaagtttaaaaatcatgcag
gaaactggtaacaagagaaagcaaattattcaagttgttcaatacttggacgagagattg
aatgagcttgaacaagagaaggaggaactgaaaaagtatcagcagcttgacaagcagcgt
aaatctctggaatacacaatttatgacaaagaacttcatgatgcacgtcagaaattgaac
gaggtagaagaggctcgaaacaaagttgccgagaactctactaagatgtatgagagtgtg
ctggaggctcatgaaaagtccaaggagctggagaagttgtccaaagatctggcaaaagaa
attcaaattttaagcaaggagaaagaagcagtagagaaacagcggacagaggctattaga
aagcgagccaagcttgatcttgattacaaagaccttcaagagaagatgtccacaaatatt
aaagctaaagatgatgctcagaaacaactcatgattctggagcgagaagttcaagaaaca
aagaatgcactcaatgatatcaagcctttgcatgagaaacaagtaaaagaggaggaggac
atcactagagggattatggatcgtgaaaagagacttagcattctttatcagaaacaaggc
cgtgccacccaatttgcaagcaaagctgctcgggacaaatggctccaaaaagaaattgat
gaatatgagcgagttttatcttcaaccttaatgcaggagaaaaaacttcaagatgaaatt
gatcagcttaaaaaagacatgagagatcaagatgatataatcgaagttcgtaaagttgaa
gtggacaaaaaagaaaccttcatatctggttatcgaaatgcttataatcagtataaagtg
gatagagacaagctgcataatgagcggaagtctctgtggacacaggagaccgaactgact
actgaaattgaacggctcaaggctgaagttgtgaaggctgagaaaagcctagatcatgca
actcctggtgatattagaaggggtctgaattctgtaaggaggatttgcagagagtatgaa
atctctggagtatttggaccaatttttgagttgcttgaatgcgaggacaagttttttaca
gctgttgaagtaactgctggaaacagcttattccatgtggtggttgataatgatgaaaca
tcaactaaaattattagacacctcaatgcccaaaaaggtggacgagttacatttattcca
ttgaacagggttaaaaaaccacatgttaattatccacagggctctgatgtgattcctctt
ctgaggaaattgaggttttctgattcatattgtagggcatttgagcaggtgtttgcaaga
actgtaatttgtcgaaatctggatgttgccaccagggttgctcgtaccgatgggcttgac
tgtatcactctggaaggtgaccaagttagtaaaaaaggtggcatgactggtggattttat
gatcatagacgctcaaaactgaggtttatgagcaccatcaaacagaatacagtgtccatc
aacctgaaggagcgtgaacttgaggaagttagatataaacttcaagagatagaccagaaa
attaatgaacttgtggctgagcagcagaaaaatgatgctggcctgggtcacgacaagtct
gagttagaacagcttaaacaagacattcttaatgctgaaagacagaaacaatccatctta
aaagctcttcaaaagaaggagaaactgcttggtaatattctgagtcaaatagatcagctc
agagctagtatagctatgaaacaagatgaaatgggaacagatcttgttgatcatttaacg
ccggaagagcgagattctttgtcacgtttgaaccctgaaatcacggctctgaaggagcag
ctgattgcttgcagggcaaatcggatagagactgaaactagaaaagaggagcttgagatg
aatctgtcaacaaatcttgaaagacgaaagcaagagttaatggcgatgaattcttctgtc
gacgttgatatgctacaggctgaagttgagagcaagtatcaggaacttaaggatgcggac
tcactagttgatcatgtcaccaaagagcttacaagggtttctcgaaatatagatgaacga
aacaagaggctcaagcagatcaaacaggaaaaggataacctgaaggctcttgaagataag
tatcagaatacacttcaggatgaagcaagagaactggaacagatgctaagtaaacggaac
acctatcttgccaagcaagaagaatactctaagaaaattcgggaactgggtcctttatct
tctgatgcctttgagacgtacaaaagaaggaacgtaaaagaattatataagatgctgcac
aagtgtaacgagcagctgcaacagttcagccatgtaaacaaaaaggcacttgatcaatat
gtaaactttactgagcaaagagaagaactccaaagaaggcaagctgaactggatgctggg
gatgagaaaatcaaggaacttatatctgttttggatatgaggaaggatgaatcaattgag
cgcacgttcaagggtgtggctaaacatttccgtgaagtattctctcagcttgtacaagga
ggtcacgggttcttagttatgatgaagaaaaaggatggtgaggaagatgacaatgatcct
gatgatgatgagccgcgtgctgatgcagagggaagagttgagaaatatattggtgtgaaa
gtgaaggtgtccttcactggacaaggagaaacacagtcaatgaaacagttatcagggggc
cagaaaactgtggtagcactggcacttatatttgccatacaaagatgtgatcctgcccca
ttttatctttttgatgagatagatgcagcactagatcctcagtacagaacagccgtgggg
aatatggttcgtgatttggcagacaggggtagcacgcaatttatcacgacgacatttcgc
ccggagctcgtgaaagttgctgataagatatatagtgtgagccacaaaaatagagttagc
aaggtcactgttgtatccagggaaggagccttagattttattgagcaggatcagtcacat
aactga
DBGET
integrated database retrieval system
