Solanum pennellii: 107023170
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Entry
107023170 CDS
T04130
Name
(RefSeq) protein transport protein Sec24-like CEF
KO
K14007
protein transport protein SEC24
Organism
spen
Solanum pennellii
Pathway
spen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107023170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107023170
Membrane trafficking [BR:
spen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107023170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
107023170
NCBI-ProteinID:
XP_015079248
UniProt:
A0ABM1VC64
LinkDB
All DBs
Position
6:60420517..60438227
Genome browser
AA seq
1070 aa
AA seq
DB search
MAAPGGPRPRNAPPPNYNPNALADGMQNLQVNRPNQPPSAPRPNTPFGQQPPFSGGPPVS
RPGPPPPGVFQRGPAPPSGPPHTGLPPPVAQSVPPFASRPPPPGVMPPSMSGAPPPPGSL
PSALGPRPGPPGPFASSPLTTGPAVPPPSSISSSISNGPPAGGPGMMQGGGRFPPPSNTM
RPPFGAPPPAMVSPGASSQPSGMRSPFGSSSSVSATPVTAQPPPPFSGSFQNMPPPSGSS
PFAAPVQAMPPPMGAPYGTQSWQPHQGAPPSAIPGSMQPPSMYGMPPPLPNQAVASITPS
IGHTSPSKVDPNQIPRPIPNTSVVLHETRQGNQANPPPPATSDYIVSDTGNCSPRYMRCT
INQIPCTVDLLTTSAMQLDLLVQPLALPHPSEEPLQVVDFGESGPVRCSRCKGYINPFVK
FIDQGRRFICNLCGHTDETPRDYQCNLGPDGRRRDADERPELCRGTVEFVATKEYMVRDP
MPAVYFFLIDVSMNAIQTGATAAACSAISQVISDLPDGPRTLVGVATFDSTIHFYNLKRA
LQQPLMLIVPDVQDVYTPLQTDVIVQLSECRQHLELLLESIPTMFQNNRIADSALGAAVK
AAFLAMKSTGGKLLVFQSVLPSTGIGALSAREAEGRTNVSAAEKEANKLLQPADKTLKTM
AIEFAEYQVCVDVFLTTQSYVDIASISVIPRTTGGQVYYYFPFSALADTAKLYNDLRWNI
TRPQGFEAVMRVRCSQGLQVQEYSGNYCKRIPTDVDLPAIDCDKTIMVTLKHDDKLQDGS
ECSFQSAVLYTTIDGQRRIRVSTLALPCTTMLSNLFRSADLDTQFACILKQAASEVPTAP
LSRIREQVTNLCINILHSYRKFCATVSSSGQLILPEALKLLPLYTLALVKSTGLRADGQI
DSRSFWINYVSPLSTPLAIPLVYPRLIAIHEFDTKENDDSLIPPSIPLSSEHITDNGIYL
LENGEDCLIYVGNSADPNVIRQLLGISSVEEIPAQFVLQQYDNPLSKKLNDIINDIRRQR
CNYLRLKLCKKGDSSGMLFLSHMVEDKTQNGLSYVEFLVHIHRHIQNKMA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccaggaggacctagaccaaggaatgcaccaccacccaattataaccctaat
gcacttgctgatggcatgcaaaatctacaagtaaataggcccaatcagccacctagtgct
cctaggcctaataccccatttgggcagcagcctcctttttctggtggacctcctgttagt
cgcccaggacctccaccacctggtgtgttccagagaggtcctgcacctcctagtggtcct
ccacacaccggattgcctcctcctgtggctcagtctgttcctccctttgcatctcggcca
cctcctcctggtgtgatgcctccttctatgagtggtgcacccccgccacctggttctttg
ccttctgcattgggtcctcgtccagggcctccgggtccttttgcttcttcgccgttgact
acaggtcctgctgtgccgccaccatcaagtatttctagctccattagtaatgggccacca
gcgggtggaccaggaatgatgcagggcggaggacgttttcctcctccaagcaatacaatg
aggccaccatttggagctcctccaccagctatggtttcacctggtgcttcttctcagcct
tcaggcatgcggtcaccctttggaagttcgtcatctgtcagtgcaacaccagttacagca
caaccaccaccaccattttccggatcatttcagaatatgccacctccttcaggttcctcc
ccatttgcagcacctgttcaagccatgcctccacccatgggtgctccttatggaacacag
tcgtggcaaccccatcagggggctccaccttctgctatccctggttcgatgcaaccacca
agtatgtatggaatgccacctcctcttccaaatcaggcagtggcttcgataactccttct
attggccataccagcccgtcaaaagttgatcccaatcaaatcccgcgtcctattccaaat
acttctgtagttctgcatgaaacccgacaaggcaaccaagccaatccccctccgcctgcc
acaagtgactatattgttagtgatactggaaattgtagcccacggtacatgaggtgtact
atcaatcagataccatgtactgttgaccttttgacaacctccgcaatgcaattggattta
ttggtgcagcccttggctcttcctcatccatctgaagagcccctccaggtggttgatttt
ggagaaagtggtcctgttcggtgctcccgttgcaaaggctatataaatcctttcgtgaag
ttcattgatcagggaagacgattcatctgtaacttgtgtggacatactgatgaaactcca
cgtgactatcagtgcaacttaggtccagatggcaggcgtagggatgctgatgaaaggcct
gaactatgccgaggaaccgttgagtttgtcgctaccaaggagtatatggtgcgagatccg
atgcctgctgtgtatttcttcctgatagacgtttccatgaatgctatacagactggtgca
actgcagctgcttgcagtgcaatcagccaagttatttctgatctccctgacggtcctcgg
acattggtcggagttgctacatttgactcaactatccacttctacaatctcaagcgtgca
ttgcagcagccattgatgcttatagtccctgatgtccaagatgtttacacccccctacag
actgatgttatcgtgcagctctcggagtgccgtcaacacctagagcttcttctagaaagc
atcccaacaatgttccagaacaacaggattgctgattcagctcttggagctgcagtcaag
gctgctttcttggcaatgaaaagcactggaggcaaacttcttgtgtttcaatcagtcctg
ccatctactggtattggggccctttctgcaagagaggctgaaggaagaaccaatgtatca
gctgcagaaaaggaggccaacaagttgctccagccggctgacaaaactctgaagacaatg
gctatcgagtttgcggagtatcaggtctgtgttgacgtgtttctcacaacacaatcttat
gtagacattgcctccatctcggtcattcctaggacgactggtgggcaggtgtactactat
ttccctttctctgctcttgctgatactgccaagctatacaatgatcttcgatggaatatc
actaggccccaagggtttgaggcagtaatgcgtgtaagatgtagtcagggccttcaagtt
caagagtattctggaaattactgtaaaagaattcctacagatgttgatctacctgcgatt
gactgtgacaaaacaattatggttacattgaaacatgatgacaaattgcaggatggttca
gaatgttcttttcagtctgctgttctttacactaccattgatggccaaagaagaatccga
gtgtcaactttggctctgccttgcacaactatgctgagtaatctatttcgatcagctgac
ttggacacccagtttgcttgcatcttaaagcaagctgccagtgaagtaccaactgctcct
ctctcacggataagagaacaagtgacaaacctttgcatcaatattctgcactcttaccgt
aaattctgtgccacagtgtcatcctcagggcaacttatccttcctgaggcacttaaactt
cttcctctttacacattggctttggttaaaagcactggacttagagcagatggacagatc
gatagtaggtccttctggataaattatgtttccccactctctactccattggcaatccct
ctggtctaccctagattgatagcaattcatgaatttgatactaaggagaatgatgattct
cttattcccccttctattccactttccagtgaacacattactgacaatggtatctatctt
ctcgagaacggtgaggactgtttgatatatgttgggaactctgcagatcctaatgttatc
cgtcagctgctaggcatttcatctgttgaggaaattcctgctcagtttgtcctgcagcag
tatgacaatccactctctaagaagctcaacgacatcattaatgatattagacgccaaagg
tgtaactatctccgcttaaaattatgcaaaaagggagattcatcaggcatgttatttctc
tcgcacatggtagaagacaagacacaaaatggactttcatatgtcgagtttctagtacat
atccatcgacatattcaaaataaaatggcttga
DBGET
integrated database retrieval system
