Solanum pennellii: 107023177
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Entry
107023177 CDS
T04130
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107023177
03036 Chromosome and associated proteins [BR:
spen03036
]
107023177
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107023177
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107023177
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107023177
microRNA pathway
RISC loading complex
107023177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
COE1_DBD
Motif
Other DBs
NCBI-GeneID:
107023177
NCBI-ProteinID:
XP_015079262
LinkDB
All DBs
Position
6:56076481..56081452
Genome browser
AA seq
904 aa
AA seq
DB search
MAEQEYGGSTEALPPPPPVPLDISPVKAEPAPVEKKLLRVPMARRGLGKKGHNIRILTNH
FQVNVSNVDGHFFHYSVALFYENGQPVEVKGIGRKVLDRVHETYHAELAGKRFAYDGEKS
LFTIGSLPRSRFEFTVVLNDITSNRNVGTSSPPNEADRKRLRRPYQSKTYKVKISFAGKI
PMQAIANAFRGQEYDNSQEALRVLDIILRQHAAKKDCLLVRQSFFHNDSNNFVDVGGGVH
GWRGFHSSFRTTQSGLSLNIDMSTTMIIQPGPVLDFLIANQNARNSVSLDWAKAKRVLKN
LRVKTATSNQEFKITGLSEKSCREQTFILKRRSKDEDGEVQTSEVTVYDYFVNDRNIDLR
YSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRASLVEKSRQKPQERMQILS
HALKLNNYVAEPLLHSCGVSINSDFTQIEGRVLAAPGLKAGNGVDIFAQNGRWNFNNKRF
FESAKVEQWAVVNFSTNCDIGELVERLTGLGETKGISVEAPLEVFEEYPQLRRAPPVIRV
DKMFEEIHSKLHGAPKFLLCLLPERKNCDIYGPWKRKNLADHGIVTQCLAPAKVNNHYLT
NLLLKINAKLGGLNSMLAVEVSRSIPMISKVPTMILGMDVSHGSPGQSEVPSIAAVVSSR
QWPSISHYRASVRTQSPKVEIIDNIFKKVSDTRDDGIMRELLLDFHASSQQRKPQQIIVF
RDGVSESQFNQVLNIELDQIIEACKFLDEKWSPKFVIIVAQKNHHTKFFQSGSPHNVPPG
TIIDNKVCHPRNNDFYLCAHAGTIGTTRPTHYHVLLDEVGFKPDELQELVHNLCYVYQRS
TTATSIVAPIGYAHLAAAQVGQWMKSEGTSETSSSQDGLRNAGPVTVPQLPSLQKNVATS
MFFC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagagtatggtggatccacagaggctctgccccctcctccccctgttcca
cttgatatctctccagtaaaagctgaaccagcgccggtggagaaaaagttattacgcgtt
cccatggctaggcgtggccttggaaagaagggacacaatattcggatccttaccaatcac
tttcaagtgaacgtatctaatgttgacggacacttctttcattacagtgttgctctattt
tacgagaatggtcaacctgtcgaggttaaaggaattggcagaaaagttctggatagagtg
cacgaaacatatcatgcagaattggctgggaagcgttttgcatatgatggggagaagagt
ttgttcaccattggttcattacctagaagtagattcgagttcacggttgtactaaatgac
ataacatctaaccggaacgttgggacctccagccctcctaatgaagctgataggaaaaga
ttaaggcggccgtatcaatctaaaacttataaggtgaagattagcttcgctggcaagatt
ccgatgcaggcaattgcaaatgcttttcgaggtcaagaatatgataactctcaagaagcc
ttacgagttctggatataattttaaggcaacatgctgcaaaaaaggattgcttactcgtt
cgtcaatcctttttccataatgactcaaataacttcgttgatgttggaggtggtgttcat
ggctggcgagggttccattcaagttttcgaaccactcagtctggattgtctttgaacatt
gatatgtctaccacaatgataatacagcctgggccagtgcttgacttcttgatagcaaat
caaaatgcaagaaattccgtttcacttgattgggcgaaggcaaaacgcgtgttgaagaat
ttgagagtgaagactgctacctctaaccaagaattcaaaataactggattgagtgaaaaa
tcttgccgtgagcagacgtttattctaaagcgaaggagcaaagatgaggatggtgaagtg
caaacttcagaagtgacagtttacgattactttgttaatgatcgtaacatagacttgcga
tattctgctgatttgccgtgcctcaatgttggaaagcctaaacgtcctacctatttcccc
attgagctctgcactttggtctcattgcaaaggtacacaaaagccttgtccacctttcag
agggcttccttggtggagaagtccaggcaaaagcctcaggagagaatgcaaattttgagc
catgctctcaaattgaacaattatgttgctgagcctctgcttcattcttgtggtgtctcg
atcaatagcgacttcactcagattgaagggcgtgtgctggctgcccctgggttgaaggca
ggaaatggagttgatattttcgcgcaaaatggcaggtggaactttaataataagagattc
tttgaatcagcaaaggtagagcaatgggctgttgtgaacttctctacaaactgtgatatc
ggcgaactagtcgaacgtttgacaggacttggagagacgaaaggaattagtgtggaagct
ccattggaagtgtttgaagagtatccacagcttagaagggctccacctgttatcagagtt
gacaaaatgtttgaagagatccattcaaaacttcatggtgccccgaagtttcttctctgt
cttcttcctgagaggaaaaattgtgacatatatggtccatggaagcgaaaaaatctggct
gatcatggtatagtaacccaatgcttggctcctgcaaaagttaacaatcactatctcaca
aaccttctccttaagatcaatgctaagctcggtggtttaaattctatgttagctgttgag
gtttctcgttccatccccatgatatctaaggtccccaccatgattcttggaatggacgta
tcacatggctctcccggccagtctgaagtcccatcaattgctgcagttgtgagttcaagg
cagtggccttcaatatctcattacagagcttctgtgcgcactcaatctcctaaagtggag
ataattgataacatatttaaaaaagtttcagacactagagacgatgggattatgagggaa
cttttgctagattttcatgcgagttcccaacaaaggaagcctcagcaaatcatagtattc
agggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagatc
attgaggcctgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgct
cagaaaaatcatcatacaaagtttttccagtctggatctcctcataatgttccaccaggg
acaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccat
gctggaacgattggtacgactcgacctacacattaccatgtgttgttagatgaagttggt
ttcaaacctgatgaacttcaagaacttgttcataatctgtgctatgtgtaccagagaagc
actactgcaacatccattgtggctccgataggctatgcccatttagccgctgcacaggtt
gggcagtggatgaaatccgagggcacatcagagacatcatcaagccaggatggtctgaga
aatgctggtccagttactgttcctcagttgcccagtcttcaaaagaatgttgctacctcc
atgttcttctgttga
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