Solanum pennellii: 107023212
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Entry
107023212 CDS
T04130
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107023212
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107023212
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107023212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
zf_RING_Vps8
zf-RING_4
zf-C3H2C3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
107023212
NCBI-ProteinID:
XP_015079316
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All DBs
Position
6:complement(51262090..51268180)
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AA seq
440 aa
AA seq
DB search
MVNFWVFLLICFVSLTASGATGSVILIGNNRTLSFEDIEANFAPSPKGSGKCGRLYIAEP
LDACSTLTNKIEPTNNFTKEPFVLIIRGGCSFEDKVRKAQAAGFKAAIIYDSGYGDIIAM
AGTSAGVKILAVFISKASGEALTQYAGSDMEVWLIPSLENSAWSIMATSFISLLSMSAVL
AMCFFVRRHHIRRERPRASRVREFHGISSRLVKAMPSLIFTSVVEDNSTSVTCAICLEDY
TAGDKLRILPCRHKFHTMCVDAWLTSWRTFCPVCKRDARTSTGDPPASESTPLLSSSLRS
VSSMSSLRSSLASSEVIHIGTGASRSPSVSRPQSISSSHNQHSLWSYQSPHLTISRSSLD
LQNASSQRSRAAYLISSNSLGYPCLSPLNSRYGSAYIPSPSNPSSSYMGSTSRQPNPLHH
SESITSFSPFASANSLPGCE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatttctgggtgtttttgttgatatgttttgtgtctttgacggcttctggagct
actggtagtgtgatattgattggaaataacaggactttgtcttttgaagatattgaagct
aattttgctccctcaccaaagggttcaggaaaatgtgggaggttgtatattgcggagcct
ttggatgcctgctcaaccttgactaacaagattgaaccaactaataacttcacaaaagaa
ccatttgtgctgataatcaggggtggatgtagctttgaagataaagttagaaaagcacaa
gctgcaggtttcaaagcagccattatctatgatagtggatatggagatataattgcaatg
gcaggaacctctgctggtgtgaagatactggcagttttcatttcaaaagcttctggagaa
gcactcacacagtatgctggctcggatatggaagtatggttaatcccaagcttggaaaac
tcagcttggtcaatcatggctacatctttcatttcactactttctatgtctgctgtactt
gcaatgtgtttctttgttcgccgacatcatatacgaagagaacgcccccgagcttctcgt
gttcgcgaatttcatgggattagtagccgtttggttaaagctatgccaagtttgatattt
acgtcagttgtggaggataattctacatcagtgacatgtgctatatgccttgaagattat
actgctggagataagcttagaattcttccatgccggcacaaatttcacactatgtgtgtt
gatgcttggctgacatcatggagaaccttttgccctgtctgcaaacgggatgcaagaact
agcactggtgatccaccagcatcagaatctacaccattgctttcttccagtctgcgatct
gtatcttcaatgtcatctctgaggtcatcattagcatcatcagaagtgatacatataggc
actggagcatctcgatcaccttcagtttctcgtcctcaatcaatctctagctctcataac
cagcattcactttggtcttaccagtcaccacatcttactataagccggagttcactggac
cttcaaaatgcatcttctcaaagatctcgtgcagcttacttaatttcatccaactcattg
ggttatccttgtttatcacctcttaattcaagatatgggtctgcatacattcctagtcct
agcaatccctcgtcgagctatatgggatcaacaagtcggcagcctaacccactgcatcac
agtgaatcaattacaagcttttcaccatttgcttcagctaactctcttcctggatgtgag
tag
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