Solanum pennellii: 107023266
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Entry
107023266 CDS
T04130
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107023266
09122 Translation
03015 mRNA surveillance pathway
107023266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107023266
Spliceosome [BR:
spen03041
]
Complex A
Other components
Complex A specific factors
107023266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
107023266
NCBI-ProteinID:
XP_015079382
UniProt:
A0ABM1H2B5
LinkDB
All DBs
Position
6:59054505..59059178
Genome browser
AA seq
491 aa
AA seq
DB search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NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggccggtacgtacggttacgaaggcggcggatctgctccgccaccaagtggcggagga
ggcggcgggtatggatcgggtggcggaggatatggtggttcaggtggtagttacggaggc
agtggcggatcatacggtggcggcggtagaggtggcggaggtcgaggaggtggaggtgga
ggctatggtggtggctcccataatcgaggaggtggaggtggataccatggaggagatcgt
ggaggtagcggtggataccaaggaggagatcgtggaggtggcggtggataccaaggagga
gatcgtggcggtggataccaaggaggagatcgtggcggtggcggtggataccaaggagga
gatcgtggaggtagtggtggataccaaggaggagatcgtggaggtcgcggcggcggtcgt
ggtggaggaagtggtaaggaaggtgattggcgttgccctaacccaagttgtggaaatttg
aactttgctagaagagttgaatgtaacaaatgtggtgcaccttcacctgctggttctgat
gatcgtggtggcagaggtggtagcagttataacagaggtggaagtgatggcggctatgga
aatagtcgagggggaagaggtgacaactatgaaagcagaaatgctggaggtggtagaact
ggttcttatggtggtagtcagggaagagatggtggtggttatgcccaaggtcctcctcat
gctcctccatcttatggggctgctgatagcaactatccaccaccttctaatacttacggt
ggaaaccccgatgcagttcccccgcctgcgagttatgttggtggacctgcatcttatccc
ccttcgtatggtgcccctggtggctatggtggggatacaccagctgatgctcgtgggggt
ggacgtggtggtccgccaggtggatatgatgggggatatggcggtggtgcccggaataca
ggaggtggttatggtagttctccagctgaggctccggtaaaggtcaagcaatgcgatgag
agttgtggagatctctgtgacaacgcaagaatatatatctcaaatttgcctcctgatgtg
accgtcgaagaacttagagaactttttgggagcattggacaagttgcaagaatcaagcaa
aaacgaggctacaaagaccagtggccttggagcataaagctatacacagacgatcaagga
aataacaaaggagatgcagttctgtcatacgaagatccttctgcagctcactctgccggc
ggctttttcaataatcacgacttcagaggttacaaaatcactgtagcgatggctgaaaag
tctgcaccaaagccgcctccggcatttggttctggccgtggcggtcgaggaggttatggt
ggtggtggtggcgggcgcagggataactacagagacggtggaggttccggcccagataga
cagtttcatggtggaaaccgttcacgtccttattga
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