Solanum pennellii: 107023297
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Entry
107023297 CDS
T04130
Name
(RefSeq) AP3-complex subunit beta-A isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
spen
Solanum pennellii
Pathway
spen04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107023297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107023297
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Others
AP-3 complex
107023297
Endosome - Golgi transport
107023297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C
HEAT_2
AP3B1_C_2
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
107023297
NCBI-ProteinID:
XP_015079430
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All DBs
Position
6:35609894..35620223
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AA seq
1138 aa
AA seq
DB search
MFTQFGATADSLSKASSLMFRIGTDAHLYDDPDDVNIAPLLDSKFDSEKCEALKRLLALI
AQGCNISNFFPQVVKNVASQSMEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPL
VRAWALRTMAGIRLHVIAPLVLVAVGRCARDPSVYVRKCAANALPKLHDLRLEENISTIE
ELVGILLNDNAPGVVGAAAAAFASICPNNFSLIAKNYRRLCETLPDVEEWGQIVLIGILI
RYSIARHGLVKESLMVAFHSPENSDSEKEGSETYFGIKERTNDIGRVVCESEIAEMVSRS
YLEGPDKYLSRPCSERAFSFRDLSDFTSAKSNDDVKILLQCTLPLLWSQNSAVVLAAAGV
HWIMAPKEELKRIVKPLLFLLRSSDASKYVVLCNIQVFAKAMPTLFVSHFEDFFVSSTDP
YPVKALKLDILSLIATDSSISPIFNEFQDYIKDPDRRFAADAVAAIGLCAQRLPNIASIC
LEGLLVLTSSEISDVDIASMDEEAIILIQAINSIKTIIKHEHSSHDKVIVHLASKLDSIR
VPSARAMIIWMLGEYNSMGHIIPKVLPTVLKYFAWTFSSEALETKLQILNAMVKVLLHAE
GEALSTFKTLLNYVLELAKCDLNYDIRDRGRLLQKLLSHYKGTHELEESTPDSTLPVLAG
HLFGRETKPIPSEPLAYRFYLPGSLSQMVLHAAPGYEPLPQPLSLICNDTTHESNMVIGM
KPPGNRATQSESYETDDANSVSGSLNEESTSGYNSQDSKTGSSGTHGSHRSGSVSDDDEH
AGPLIHLSDSGNAHGNQLGPGFYQNFDSNDLGELMSIKSLESWLDDNPGSTHNPVELNNV
CQSLARISIGDISSRVKPKSYTLLDPANGNGLSVEYIFSSEVSSISPLLVCIQVTFTNNS
VEAMSNLQLIEEVSSMRVESSDQVLTSDESSKMSVNDVPTLVPMEEIAKLERGQVMQRTL
QVRFHHHLLPLKLLLWCNGKKYPVKLRPDIGYFVKPLPMEINMFSIKESQLPGMFEYIRR
CTFIDHIEELNKLESPLAKDNFLVICETLALKVLSNSNLFLLSVDMPVGTNLDDASGVRL
RFSGEILSNSIPCLITITLEGRCSELLDTKVKVNCEETVFGLNFLNRVVNYLTEPARL
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgttcacacagtttggcgcgacggcagattcactgagcaaagcctcaagtttgatgttc
cgcatcggcacggatgcccacctctacgatgatcctgatgatgtcaatattgctcccctt
ctcgacagcaaattcgactccgaaaaatgtgaagccctcaagagattacttgctctcatt
gcccaaggctgcaacatctccaatttcttccctcaggtggtgaaaaatgtggcttcacaa
tcaatggaagtcaagaaactggtctacttgtacctcctgcattatgctgaaaagcgtcca
aatgaagcattgctttcaattaactgtttccagaaggatttgggagatcctaatccattg
gtaagggcgtgggcacttcgtacaatggcaggaattcgccttcatgtgattgcacccctt
gttcttgtagctgtgggaagatgtgcaagagatccatcagtatatgttaggaagtgtgct
gctaatgcactcccaaagttgcatgatttgcgtttggaggagaatattagtactattgaa
gagcttgttgggattcttctgaatgacaacgctcctggagtagttggagctgctgctgct
gcatttgcttctatatgtcctaataatttctctctaattgcaaaaaattatagaaggctg
tgcgagactctccctgatgtggaagaatggggtcagattgttttgatagggatccttata
cggtatagtattgctaggcatgggcttgttaaagaatccttgatggtggctttccattct
ccagagaattctgattcagaaaaggaaggatctgaaacctattttggaatcaaagagaga
accaatgacattgggagggtagtttgtgaatctgagatagcagaaatggtatccaggagt
tatcttgaaggaccagataagtatttatcccgaccatgttccgaaagagctttttctttc
agggacttatcagactttacatccgcaaaaagtaacgatgatgtgaagatcctgctacag
tgtactttacctctactgtggagtcaaaatagtgcagtggtacttgctgctgctggagtg
cactggattatggcaccaaaagaagaattaaaaagaattgttaagcctttgttgtttctg
ttgagatcatccgatgcctcaaaatacgtggtactctgtaacattcaagtgttcgctaaa
gcaatgcctaccttgtttgtttcccatttcgaagacttcttcgtgagctctactgatcca
tatccagtgaaagctctgaagcttgacatactatctttaattgcgacagattcatcaatt
tcacctatttttaatgagttccaggattatattaaagatccagacagaaggtttgctgca
gacgctgttgctgctattggcttatgtgcccaacgacttccaaatattgcaagcatatgt
ttggaagggcttttagttctgacttcatctgaaatttcagatgtggacatagcatcaatg
gatgaagaagcaattattctgattcaagcaataaattccatcaaaacaatcataaaacat
gaacactcaagtcatgataaagtgattgttcatttggctagtaagttggattctatccgt
gtaccaagtgcacgtgcaatgattatttggatgttgggcgagtataactccatgggacat
ataattccaaaggtgttacccacagttctcaagtattttgcctggactttttcttctgaa
gcacttgaaacgaagctccagattcttaatgcgatggtcaaggtcttattacatgcagaa
ggggaagcactatcaaccttcaagacactcttgaactatgtacttgaactagctaaatgt
gacttgaactatgatatccgtgaccgtggacgtcttctacagaaactcttatctcactac
aaaggcactcatgagttggaagaatcaactcctgacagcacattgcctgtacttgcagga
catttatttgggagagaaacaaaacccatcccttcagaaccattagcttatcggttttat
cttcctggatctctttcacagatggttcttcatgctgctccaggatatgaacctctccca
cagccattaagtttgatctgcaatgatactactcacgaatccaatatggtaataggtatg
aaaccaccagggaatagagccacccaaagtgaatcatatgaaactgatgatgctaactcg
gtatctggatcactaaatgaagaaagcacatctggttacaattctcaagattctaaaact
ggttcaagtggaactcacggtagccacaggagtgggtctgtgagtgatgatgatgagcat
gctggtccactgattcatctttctgacagtggcaatgctcatgggaatcagttgggacca
gggttttatcaaaattttgactccaatgatcttggggaattaatgtcgataaaatctctt
gaatcctggttggatgacaatcctggttctacccacaatccggtagaattaaataatgtc
tgtcaatcattggccagaatttcaattggagatattagtagcagagtgaaacctaagtcc
tacactttgttagatcctgcaaatggaaatggcttgagtgtggaatacatattttcatca
gaggtgtcaagcatatctcctctgcttgtttgtattcaggtcacatttaccaacaattca
gtggaagctatgtcaaatttacagttgatcgaagaggtttctagcatgagggtagaatct
tcagatcaagtgctgacatcagatgagagttccaagatgtctgttaatgatgtgccgact
ctagttccaatggaagaaattgctaagctggagcgagggcaggttatgcagagaaccctt
caggtccggttccaccatcatctgttaccccttaagctgcttttatggtgcaatggcaag
aagtatcctgtgaagttgagacctgatattgggtattttgtaaaacctcttcctatggaa
atcaatatgttctcaatcaaggaatctcagctgcctggaatgtttgaatatataaggagg
tgtactttcattgaccatattgaagaacttaacaagcttgaaagccccttagcaaaggac
aacttccttgtaatctgtgaaactttggctttgaaggtgcttagtaattccaatcttttt
cttctatccgtggacatgcctgttggtaccaacctcgatgatgcatcaggtgtaaggctt
aggttcagtggtgagatattaagcaactcaatcccatgtttaattactattactcttgaa
ggtagatgctccgaactgctggacactaaagtaaaagtcaactgcgaagagactgttttt
ggcctgaactttttgaacagggttgtcaattatttgactgagcctgctcgattgtga
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