Solanum pennellii: 107023323
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Entry
107023323 CDS
T04130
Name
(RefSeq) golgin candidate 5 isoform X1
KO
K20286
TATA element modulatory factor
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107023323
Membrane trafficking [BR:
spen04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
107023323
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Seryl_tRNA_N
Thyroglob_assoc
Motif
Other DBs
NCBI-GeneID:
107023323
NCBI-ProteinID:
XP_015079465
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All DBs
Position
6:complement(52342334..52358815)
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AA seq
1011 aa
AA seq
DB search
MAWFGGKLDLANLDLAGAVNKLSESVKNIEKNFDTALGLEEKSESSSNEASGLWPSTTDR
RALFDPVMSFMGQKSEETAEESVEKAESSKPTLPTGEVVEDSAETTTRRGVVPKEPKEET
TDIIEETKSVQEPIEEAKDVDAKSNQMISAEEETEAARAVDVKLNSSAEPSFDQEEQRSV
TGPDERKAEINSLAEASKVIELDQETSPGILQKNIPERESSENLELVASQSSNALSQTEV
GIPLLVDSQENTGNDGEQKKEVTEESPPVQLEDASNYPTDREQKKEVTVESPSAESRDAS
SDQADSGRPSVSDSVTASEGESLEEHSNRSFLGDQHTDEGLKKLSDTVMPENELVSRPVE
ATQRGNDQETGVKERLSSGSNSSDVTNSVVEVEKLKKEMKMMETALQGAARQAQAKADEI
AKLMNENEQLKAVTEDLRRKSSDAAIESLREEYHQKVSALERKVYALTKERDTLRREHNK
KSDAAALLKEKDEIITQVMAEGEQLSKKQAAQEAQMRKLRAQIRELEEEKKGLHTKLEVE
ENKVESIKRDKAATEKLLHETVEKHQAELATQKEYYTNALNAAKEAEALSEARANNEART
QLEGRLREAEDREAMLVQALEELRQTLTRTEQQAVFKEDMLRREIEDLQKRYQASERRCE
ELITQVPESTRPLLRQIEAMQETNSRKAEAWAAVERTLNSRLQEAEAKAATSEEKERSIN
ERLSQTLSRINVLEAQISCLRAEQTQLTRSLDKERQRAAENRQEYLALKEEAETNEGRVN
QLEEEIKELRRKHKQELQEALTHQELLRQELEREKTARLDQERAARSTNYVPDQSPIMKQ
KSGIENVAGSLTRRLSSASSLSSMEESYFLQASLDSSDNLSERRNALEGNMSPYFMKSMT
PAFRQKDGELASYMSRLASMEAIRDSLAEELVKMTAECEKLRSEASMLPGIRAELDALRR
RHSAALELMGERDEELEELRADIIDMKEMYREQVNLLVNKIQVLSSSLSAT
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtttggtgggaaacttgatttggcgaacttggatcttgccggtgccgtgaat
aagctcagtgagagtgtcaaaaacattgaaaagaatttcgacactgcacttggtctcgag
gagaaatctgagtctagtagcaatgaagcttcagggttatggccttcaactacggatagg
agggccttatttgatcctgtcatgtcttttatggggcaaaaaagtgaggagactgctgaa
gaatctgtagagaaagctgagtcgtcaaagcccaccttgcccacaggggaagtagttgaa
gattcagctgagactacaactcgacgtggtgtggttcctaaagaaccaaaagaagaaaca
acggacattattgaagaaactaaatcggttcaagaacctattgaagaagcaaaggatgtt
gatgcaaaatcaaatcaaatgatatctgctgaagaagaaactgaggcggcaagagctgtt
gatgtcaaactgaattcttctgcggaaccaagttttgatcaggaggaacaaagaagtgtt
actgggccagatgaaagaaaagctgaaattaattcactggcagaagcatcgaaggtcatt
gagcttgatcaggaaacatctccaggaatcctccaaaagaatattccagagcgagaatca
tctgaaaacctcgagttggttgcttcccaatcatcaaatgctttatctcaaactgaagtt
ggtatcccgctgcttgttgattcacaggaaaataccggtaatgacggggaacagaagaaa
gaagtcactgaggaatctcctcctgttcaattagaggatgcatcaaattaccctacagac
agggaacagaagaaagaagtcaccgtggaatctccttcagctgaatcacgggatgcatca
agtgaccaagcagatagtggaagaccttctgtttcagattctgtaactgccagcgaaggt
gaaagtcttgaagagcattctaacaggagctttcttggtgaccagcacaccgatgaaggt
ctgaagaagctatctgatacagttatgcctgaaaatgagttggttagtagacctgtggag
gctacccagcgaggaaatgatcaggagactggtgtaaaagaacggttgagctccggaagc
aactcttcagatgttaccaattcagtggttgaagtggagaagctgaaaaaggaaatgaaa
atgatggaaactgcattacaaggagctgctagacaagctcaggctaaagctgatgaaatt
gcaaagttgatgaatgagaacgagcaattgaaggctgttactgaggatctgagaaggaag
tccagtgatgcagcaattgaatctctgcgagaagagtaccatcaaaaagtttctgctctt
gagaggaaggtttatgctctcaccaaagaaagggatacacttcgcagggaacataataag
aagagtgatgctgcagctcttctcaaagagaaggatgagataattactcaagtaatggct
gaaggtgagcagctttctaaaaagcaagctgcccaagaagctcagatgagaaagttaagg
gcacagatcagagagcttgaagaagagaagaaaggattacataccaagcttgaggttgaa
gagaacaaagtagagagtataaagagggacaaggcagcaacagaaaagttgcttcatgaa
acagtcgaaaaacatcaagcagaacttgcaactcaaaaagaatactatactaatgcttta
aatgccgcaaaagaagcagaagctttatctgaggcacgggctaacaatgaagctagaact
caactagagggtcgtctcagagaggctgaagaccgtgaagcaatgcttgttcaggcactt
gaagaattaaggcaaacacttaccagaacggagcagcaggcagtttttaaagaagatatg
ctccgcagagaaattgaggatctccagaaaagataccaagccagtgaacgtcgatgtgag
gagttgataacacaagttcccgaatctaccagacctcttctcaggcagatagaagccatg
caggaaacaaactccagaaaggctgaagcttgggctgctgttgagagaactttgaattca
cgtcttcaggaagccgaggcaaaagctgcaacttcagaagaaaaggagcgatctattaat
gaacgcctttctcaaaccctatcccgaatcaatgttcttgaggctcagatatcttgtctt
agagctgagcagacacagctaacaaggtcccttgacaaagagagacagcgggccgcagag
aataggcaagaatatcttgctctaaaggaggaagctgagactaacgaaggtcgtgtgaat
cagcttgaagaggaaattaaagaactcagaaggaaacacaagcaggaattacaagaagca
ttaactcatcaggaactcctgcggcaggagttggaaagggagaaaactgctcgtttggat
caagaaagggccgctcgttctactaattatgtgcctgatcagagcccaataatgaagcag
aaatctgggatagaaaatgttgcaggaagtttgacacgcagactttcaagtgctagcagc
ttgagtagtatggaggaaagctattttctgcaagcatctttggactcgtctgacaattta
tctgagcgtagaaatgcattagagggtaatatgagtccatactttatgaagagtatgacg
cctgcatttcgccagaaagatggggaacttgcgtcttatatgtctcgactggcatctatg
gaagccatccgtgactcccttgctgaggagttggttaaaatgaccgcagagtgtgaaaag
ctacgttcagaagcttccatgctgcctggcatccgagcagagctagatgcacttaggagg
agacactcggcagctcttgaattgatgggtgaacgtgatgaggagttggaagaacttcgt
gctgatattattgatatgaaggagatgtacagagaacaagtaaatttactcgtgaataag
atccaggtgcttagttcatcactgagtgccacctga
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