Solanum pennellii: 107023332
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Entry
107023332 CDS
T04130
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107023332
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107023332
Membrane trafficking [BR:
spen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107023332
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107023332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_RFWD3
WD40_like
Beta-prop_Nup120_160
TPR_GEMI5
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
107023332
NCBI-ProteinID:
XP_015079479
LinkDB
All DBs
Position
6:52416262..52429008
Genome browser
AA seq
912 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKAVDLHPTEPWILTSLYSGTLCIWNYQTQTMAQSFEVTELPV
RSAKFIARKQWIVAGSDDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTRSCVQTLEGHTHNVSAVCFHPD
LPIIMTGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKVIWAKHNEVQTINIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAIRESTSRIKIFSKNFQ
EKKSIRPTFSAEHIYGGTLLAMCSNDFICFYDWIECRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSAHLDSGRSVDEQGVEDAFELLYEINERVRTGIWVGDCFIYNNS
SSRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVVGYTLLLSLIEYKTLVM
RGDWDRANAVLPSIPKDHHNSVARFLESRGMIEEALEVATDADYRFELAIQLGKLDIAKE
IAVVAQSESKWKQLGELAMSAGMLEMAEDCLKYANDLSGLLLLYSSLGDAEGIAELASLA
KEHGRNNVAFLCLFLLGKVEDCVQLLVDSNRIPEAAFMARSYLPSKVSEIVAMWRKDLNK
VNQKAAEALADPEEYPNMFEHWQIALAVEARVAEERGVYPPAADYGNYADRPTSNLVEAF
SNMRMDEEEPLENGEMDHEVVEQNGDEVQEQGQDGTQQESQEEAVVDAESTDSAVLVNGN
EAEEEWVLTPHN
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcctctaagattggagattaagaggaaacttgctcaaagatcagaaagggtaaaggcc
gtggatctccatcctacggagccatggatattgacaagtttatattcagggaccctttgc
atttggaactaccagacccagacaatggcacaatctttcgaagttactgaattaccagta
agatcagcgaaatttatagcacgcaaacagtggattgttgcgggttccgatgacatgttt
attcgtgtatacaattataataccatggataaggtcaaagtattcgaggcgcacacagat
tatattaggtgtgtggctgttcatcctactctaccatatgtgctgtcatcatctgatgac
atgcttataaagctctgggattgggagaagggatgggtatgcactcaaatttttgagggt
cattcccattatgtgatgcaagtcacatttaatccaaaagacaccaatacttttgctagt
gcatctcttgataggactataaagatttggaaccttggctctcctgaccctaactttaca
ctggatgcccatctgaaaggggttaattgtgtagattatttcactggtggtgataaacct
tatctaattactggttctgatgatcacactgctaaggtctgggactatcagacaagaagt
tgtgtccagactcttgaaggtcacacacacaatgtttctgctgtatgttttcatccagat
cttcctattataatgactgggtctgaagatggtactgttcgtatatggcatgcaactact
tacagactcgagaacacgttgaattatggccttgaaagagtttgggctattggttacatg
aaaggttcaagaagggttgtaattggttacgatgagggtaccattatggtaaaacttggt
cgagaggtgcctgttgctagcatggataatagtggaaaagtcatatgggctaagcataat
gaggttcaaactattaacatcaagagtgtgggtgcggattatgaggttactgatggagaa
agattgcctttggcggtcaaggaattgggaacttgtgacctatacccacaaagcttaaag
cataaccccaatggaaggtttgttgttgtttgtggagacggtgagtatatcatatatact
gctctggcctggagaaataggtcatttggctcagctctggaatttgtttggtcgtctgat
ggagagtatgctatccgagaaagtacttcaaggattaagattttcagcaaaaatttccag
gaaaaaaagagtatccgcccgactttctctgctgagcacatctatgggggtaccttattg
gcaatgtgctcaaatgatttcatttgcttttacgattggattgagtgcaggttgatacga
cgtattgatgttaatgtcaaaaacctctactgggctgacagtggtgatctggtggctatt
gctagtgatacttcattctacatactgaagtataatcgcgatgttgtctctgcacattta
gatagtggaagatctgtagatgaacaaggtgttgaagatgcttttgaacttctttatgag
ataaatgaacgtgtcagaactggaatttgggtaggagattgtttcatttacaacaattct
tcttcgagactgaattattgtgtaggcggcgaggtgaccacaatgtttcacttagaccga
cccatgtacctgctgggatatctcgctaatcaaagtagagttttcctgattgacaaagag
ttcaatgtcgtgggatatactcttctgctcagcttgatagagtacaagacacttgtgatg
cgtggtgactgggacagagctaatgcagtcttaccatcaattcctaaggatcaccataac
agtgttgctcgtttcttggaatcacggggtatgattgaggaagcattggaagttgcaaca
gacgctgactacagatttgaacttgccatacagttgggtaaattagacattgcaaaggaa
attgctgtagtagcacagagtgaatccaaatggaagcagttgggtgaactggcaatgtct
gctggaatgctggagatggcagaggattgtttgaaatacgctaatgacttgagtggtttg
ctgctgctttattcctcgttaggagatgctgaaggaattgctgaattagcatctcttgca
aaagagcatggaagaaacaatgttgcattcctttgcctgttcctcctgggtaaagtagaa
gattgtgttcagctgttggttgacagcaaccggatacctgaggctgcatttatggcaaga
tcttaccttccaagtaaggtttctgaaatagttgcaatgtggaggaaggaccttaataag
gttaaccagaaagcagcggaagctttggctgatcctgaagaatatcccaacatgtttgag
cactggcaaattgcacttgcagttgaagctagagtcgcagaggaaaggggtgtataccca
ccagcagcagattatggaaattatgctgatagaccaacttccaaccttgtagaagctttc
agcaacatgagaatggatgaagaagaaccccttgaaaatggagaaatggaccacgaggtt
gtggaacagaatggtgatgaggtgcaagagcagggacaagatggcactcaacaggagagc
caagaagaggctgttgtagatgctgaatctactgatagtgcagtactcgtcaatggaaac
gaggctgaagaagagtgggtgcttacaccacacaactag
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