Solanum pennellii: 107023463
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Entry
107023463 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107023463 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107023463
Membrane trafficking [BR:
spen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107023463
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
107023463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
WD40
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Synaptobrevin
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
107023463
NCBI-ProteinID:
XP_015079646
LinkDB
All DBs
Position
6:44039429..44057539
Genome browser
AA seq
1074 aa
AA seq
DB search
MFAKFFEKLNPTPQSNAPEGSEKLTDLEATVSVHYGIPSTASILAFDPIQQLLAIGTLDG
RIKVISGSKVEGLLFSPKPLAFKNLEFLQNQGFLVGVSNGNEIQVWDLENRRISSSLQWE
SNITAFSVIYDTHYMFVGDEYGYLSVLKYEEGIMELLPYHMPPNLIAEAANISMPDQLAI
VGLLPQPNSHGNRVLIAYENGLIVLWDITEDRAALVREYKQHQSKDEIVVYALKNAKEEK
FRASSDNQEGEKEISSLCWLSSDGSILAVGYIDGDILLWNISVRGKKSPEAEDSSNYVKL
QLSAGDKRLPVIILRWSTKNTQNGCGGQLFVYGGDSIGSEEALTVLNLDWSSGIKALKCV
GRVDLGLDGSFADAIVVSNANETGIGDASSLFVLSNPGKLHCYDKASLSSLKSNPEKKHA
DFAVKYPTLVPTLEPRITVAYLYPVDRKWNSSRTPSEEVVVTQVRPAHGVTELEIKMPLS
SSIPRQPTKDDGIERILVAGYLDGSVRLWNATFPVFTLLAVLESQGIQATGSRTAISALD
FSSTALTLAIGHQCGQVHMYSLKGQSKTTSSNLATDAEQDAQFCPGDTGFQFSLIKSPVC
ILKFVAVGARLVAGFESGQVTMLDVSSSSALFITDCSSNSSSRITSVAVKTLGNALEDTA
EQSEEGTRNACVKEVISVLNRDAEVVLLDGSTGKKIGSQAKHQKEMSTAISLHVLDGITS
VSEESQKHSSTQDSAVQPEDLMQKCIDSQILLCCQEGLHLFSLSSIIQGDIKPIREVKLA
KPCSWTSILKNDIENFGLVLVYQNGAVEVRSLVDLAVLGESSLISILRWNSKINVDKIIS
SPGKSMISLVNGSEFAVISLLAFGNDFRVPDALPLLYKKSLATAVDDASASQHQKKKQNV
TTSIFGGIVKGLKGLKGEQAADSVNARDALVSHLENIFSRFPFSDPTDVTDDLGSLELKL
DDIEIDEPVHVASSSLSSDDVKIEKENDRNRLLEGGSSDAKPTARTREEIIAKYRNKGDA
ASAALQAKDKLLERQEKLDRLSRNTEELQNGAENFADLAGELVKAMEKRKWWNL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaaattttttgaaaagctcaatcctacgccacagagtaatgctcccgaagga
agtgaaaaattgacagacctggaagcaacagtttctgttcactatgggattccatctaca
gcatccattctggcatttgaccctattcagcaactcttggcaataggaacattggatgga
aggattaaagtgattagtggatctaaggtcgagggccttcttttttctcctaaaccattg
gcgttcaagaatttggagttcctgcaaaaccaaggatttttagtgggcgtctcaaatgga
aatgaaattcaggtttgggatctagagaacaggagaatatcttctagtttacagtgggag
tccaatattactgcattctccgttatctatgacactcattacatgttcgtgggagatgaa
tatggttatctctctgttctgaagtatgaggaaggaatcatggaactgttgccttatcac
atgcctccgaatcttatagctgaagctgctaatatttcaatgcccgaccaactcgccatt
gttgggttacttccccaacctaattcacatggaaatagggtcctgattgcttatgagaat
ggattaattgttctctgggacattacagaagatcgagctgctcttgttagagagtataaa
caacatcaatcaaaggatgaaattgttgtttatgctttaaaaaatgccaaggaagagaag
tttcgtgcttcatcagataatcaagaaggcgaaaaagaaataagctcactctgttggttg
tcatctgatgggtcaattttggctgttggttatattgatggagatatcttgctgtggaat
atatcagttcgtggcaagaaaagtccagaggccgaagattcgtctaattatgttaagctg
cagctctcagcaggagacaaaagactccctgttattatactgcgttggtccaccaaaaat
acacagaatggttgtggggggcaactatttgtctacggtggtgattcaattggatcagaa
gaagccttgacggttctgaatcttgattggtcctccgggataaaagcactgaaatgtgtt
ggtcgagtagaccttggacttgatggatcttttgcagatgccatcgttgtttcaaatgct
aatgaaacgggaattggtgatgcttcttccttgtttgtgttgtcaaatccagggaaactg
cactgttatgacaaggccagcttgtcttctttaaaatctaacccagagaagaagcatgca
gattttgctgttaagtatcctacacttgtacctacccttgaaccacgtataactgtggca
tacctatatccagtggataggaaatggaattcctcaaggacgccttcagaggaagttgtg
gttacgcaagtccgtccagctcatggtgtgactgaattggaaatcaaaatgcctctaagt
agtagtattcccagacaacctactaaggatgatggaatagagagaatacttgttgctggc
tatctggatggatctgtccgtctgtggaatgcaacatttccagtctttacacttttagct
gttctggaatctcagggaattcaagccactggttctagaacagcaatatccgctttggac
ttctcctctactgctttaactcttgccatcggccaccaatgtggccaggtgcatatgtat
agcctcaaggggcagtctaagacaactagctccaacttggctacagatgctgaacaggac
gctcagttctgtccaggtgatactggatttcagttttccctcataaaatctccagtatgc
atcctaaaatttgtagctgtgggtgccaggcttgttgctggttttgaaagtggccaggtt
accatgcttgatgttagttcatcatcagctttgttcattacggattgttcatccaactca
agttccagaatcacttctgtggctgtgaaaacattgggtaatgctcttgaagacactgcg
gaacaaagtgaagagggaacaagaaatgcatgtgtgaaggaggttatttcagtattaaac
agagatgcagaagtagtattgcttgatggctccactggcaaaaaaattggctcccaggca
aaacaccaaaaggagatgtcaactgctatatctctacatgttttagatggcattacatct
gtctctgaagaatcgcaaaagcattcttcaacgcaagacagcgccgtgcagcctgaagat
ttgatgcagaagtgtattgattcacaaattttactttgttgtcaggagggcttgcattta
ttctccttaagttctataattcagggcgatatcaaacctatacgtgaagtgaaacttgct
aaaccatgttcttggacttccattcttaagaatgacattgaaaattttggactggtttta
gtgtatcagaatggagcagttgaagtaaggtccttggtggatcttgctgtcttgggagaa
tcctcattaatatctattcttcgatggaattccaagataaacgtggataagatcataagt
tctcctggtaaatcgatgatttcactggtgaatgggtctgaatttgctgtcatttcactg
ttggcctttggaaatgacttcagggttccggatgccttacctttactttataaaaaatct
ctcgcaactgctgtagatgatgccagtgcatcccaacatcaaaagaagaaacagaatgtt
accaccagtatttttggtggcatcgtgaaagggttgaaagggcttaaaggagagcaggct
gctgattctgtgaatgctcgagatgctcttgtttctcatctggaaaacatattctcgaga
tttcctttctcagaccctacagatgtaacagatgaccttggaagcctggaactgaagtta
gatgatattgaaattgatgaacctgttcatgttgcttcatcatctctcagcagtgatgat
gtcaaaatagaaaaggaaaacgatagaaacaggttgttggaaggtggttctagtgatgcc
aagccaacagctagaactcgtgaagaaatcattgctaaatatagaaacaagggggatgcg
gcctctgctgcattgcaggcaaaagataagcttctcgagcgtcaagagaaacttgatagg
cttagtagaaacactgaagaattacaaaatggtgcggagaactttgcggatcttgcaggt
gagcttgtcaaagccatggagaaacgcaagtggtggaacctctaa
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integrated database retrieval system
