Solanum pennellii: 107023468
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Entry
107023468 CDS
T04130
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Pathway
spen04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107023468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107023468
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107023468
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
U-box type E3
107023468
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
PUB10_N
ARM_PUB
U-box
ARM_ARMC5
Neurochondrin
HEAT_2
Arm_2
MLKL_N
PUB2_N
HEAT_EZ
zf-Nse
zf-RING_UBOX
zf-C3HC4_4
RPW8
Motif
Other DBs
NCBI-GeneID:
107023468
NCBI-ProteinID:
XP_015079655
UniProt:
A0ABM1H309
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All DBs
Position
6:complement(58129616..58134813)
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AA seq
661 aa
AA seq
DB search
MEEGGGALVQKLIEVVNEIAAISDYRTSVKKEYCNLGRRLKLLIPMFEEIRDIKEPVPEN
SMIALVSLKEALESTKELLKFGSQGSKIYLVLEREQIMNKFHQVTTQLEQALGGVHYQEL
DISDEVKEQVELVLSQFQRAKGRADTPDAELREDLLSLYSQSNDPTIDPAVLRKLVKKLQ
LTGLYDLTQESCALHDMVTATGEDPEERIEKMSLVLRKIKGFVLTETPVIDSSSREKSST
CSGQVSIETTHKAPVIPDDFRCPISLELMKDPVIVSSGQTYERSSIEKWLEAGHSTCPKT
QQVLTSNVITPNYVLRSLIAQWCEMNGVESPKRPGSSPNKSASACTPAEHSTIENLLRKL
TSGSPEDRLSATGEIRLLAKRNADNRVAIAEAGAIPLLVDLLSTPDSRIQEHAVTALLNL
SICEDNKRSIVTSGAVPGIVHVLKKGSMEARENAAAALFSLSVIDENKVIIGTFGAIPPL
VTLLSDGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVVTLMGLLTEPQGSMIDEALAIL
AILSSHPEGKTTIGAAGAVPVLVNVITSGSPRNKENAAAVLVHLCSGDQHYLVDVQELGI
MGPLLDLVQNGTERGRRKATQLLERINRYAEQQKQAQTEPEAPIHNQLSESPPSSTNVLE
C
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggaggaggagcgttagtgcagaagctgattgaggtagttaacgaaatagca
gccatttcggattacagaacttcggtgaagaaagagtattgcaatctaggtaggaggctt
aaattattgattccaatgttcgaagagattcgggatatcaaagaaccagttcctgaaaac
tcaatgatagctttggtttcattgaaagaagctcttgaatcaaccaaagaattgctcaaa
ttcggcagccagggaagcaagatttatctcgtcttagaaagggagcagataatgaataaa
tttcaccaagtgacaacccagctggaacaagctttgggtggagttcattatcaagagctt
gacatatctgatgaagttaaagagcaggtagagcttgtcctttctcagttccaaagagcc
aaaggaagggctgatacacctgatgctgaactccgtgaggatctattgtccctttacagc
cagagtaatgatcctactatagatccagctgtcctaaggaaattggttaagaagttacag
ctgactggattatacgatctcacacaagaatcatgtgctttgcatgatatggtcactgct
actggtgaagacccagaggagagaatcgagaagatgtcacttgtactgaggaaaattaag
ggctttgtgctgactgagactccggtgattgattcttcttcgagggagaagtcttcaact
tgtagcggacaagtatctatcgagacaactcataaggccccagttataccagatgatttt
cggtgtcctatatccctggaattgatgaaagatcctgtcattgtttcatccggccagact
tatgagcgttcttctattgagaaatggctggaagcagggcatagcacttgtcccaagaca
caacaagtcctcactagcaatgttatcacaccaaactatgtgttgcggagcctcatagca
cagtggtgtgaaatgaatggagttgaatcacccaaacgaccaggtagttcacccaataaa
tcagcatccgcctgcacgcctgctgagcactcgacgatagaaaatctcctgagaaagctc
acatctggcagccctgaagatcgtctctcagccacaggtgaaatccgcctgcttgctaaa
cgcaatgctgataatcgtgttgcaatagctgaagcaggtgctattcctctgcttgttgac
cttctttccacacccgattctcggatccaagagcatgctgttacagcactacttaacctt
tctatctgtgaggataacaaacggagcattgtaacatcaggggcagtgcctggtatcgtc
catgtgcttaagaaggggagcatggaagcacgtgaaaatgcagcggctgcgctatttagc
ctttcagttatagatgagaataaggtcataattggtacttttggagcaatacctccactt
gtaacattattaagtgatggcacccagagagggaagaaagacgctgctaccgcacttttc
aatctgtgcatttatcaagggaacaagggcaaggcagtaagggctggagttgtggtcact
ctgatggggctgcttacggaacctcaaggtagtatgatcgacgaagcacttgccatttta
gcgatattgtctagtcatccagaaggaaagacaaccattggagctgcaggggcagttcct
gttttggttaatgtgatcacaagtggttctcccagaaacaaagaaaatgcagctgcagtt
ttggtacacctttgctctggggaccaacattatctagtggatgttcaggagctaggaata
atgggaccattgctggatttagtacaaaatggtactgaaaggggtagacgaaaggcaacc
cagttgcttgaacgaataaatagatatgctgagcagcaaaaacaggcccagacagaaccc
gaggctccgattcataaccagctttcagagtcaccaccatcatcgacaaatgtcctggaa
tgctga
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integrated database retrieval system
