Solanum pennellii: 107023539
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Entry
107023539 CDS
T04130
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107023539
Membrane trafficking [BR:
spen04131
]
Protein recycling
Others
EARP complex
107023539
Endosome - Golgi transport
Tethering complex
GARP complex
107023539
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
EXOC6_Sec15_N
COG5_N
COG2_N
COG4_N
Vps54_N
NleF_casp_inhib
Motif
Other DBs
NCBI-GeneID:
107023539
NCBI-ProteinID:
XP_015079743
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All DBs
Position
6:3745568..3759035
Genome browser
AA seq
778 aa
AA seq
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MGVDDEVPIDDKAKRMRDLLSSFYSPDPNSTSVPPNTSSRFATLDTINTTAFDADQYMNL
LVQKSNLEGMLQRHVEMAAEIKNLDTDLQMLVYENYNKFVSATDTIKRMKNNIVGMETNM
EQLLEKIMSVQSKSDGVNTSLFEKREHIEKLHRTRNLLRKVQFIYDLPARLAKCIKSEAY
ADAVKYYTGAMPIFKAYGDSSFQDCKRASEEAIAVITTHLQGKVFSDSESIQARAEAVML
LKQLNFPVDNLKVQLFEKLEQFLVDLHLESKELPPASVDQGNLPESATSAAHEASIREFS
EAVRAYRVIFHDSEQQLSRLAQNLPKMHFESTQKHIKKQLASSDLVAMLRIIWTDVLLMD
GVLPEAGLRDITMEAAHVAVKQYVASRFSHLLLDISGAVVKVGNQMEGLEEKNSLQAILE
ASKKAVVQGSMDVLRDFRQLLDENLELLSKLRDLVIDWVQEGFQDFFRKLNDHFLLLSGK
KYPAGQDLSFHEGIQRDKILPALVLVLAQLSVFVEQNAIPRITEEIASSFSGGGSRGYEN
GPAFVPAEICRTFRAAGEKFLQHYINMRTQKISVVLNKRFTTPNWVKHKEPREVHMFVDL
LLQELDSIIKEVKNMLPEGIQRKHRRSDSSGSSISSRSNPLRDDRMVRSNTQQARSQLLE
SHLAKLFKQKMEIFTKVEHTQDSVITTIVKLCLKSLQEFVRLQTFNRSGFQQIQLDIHFL
KTTLKDTADDEAAVDFLLDEVIVAAAERCLDPIPLEPSILDRLTQAKLAKAREQSPTS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtagatgatgaagtaccgattgacgataaagcgaagagaatgagagatctatta
tcgagcttttactctccagatcctaattctacttcagttccgcctaatacttcttccaga
tttgcaactttggataccattaacactactgccttcgatgccgatcagtacatgaattta
cttgtgcagaagtccaatttggaaggtatgcttcagaggcatgttgaaatggctgctgag
ataaagaatctcgatactgacctgcaaatgctggtatatgaaaattacaacaagttcgta
agtgccacagacacaattaaaaggatgaaaaacaatattgttggcatggagacaaatatg
gagcagcttcttgaaaagataatgtccgtgcaatctaaaagtgatggggtcaatacttct
ctttttgagaagagggaacacatagagaaattgcataggacccgtaatcttctacgcaaa
gttcagttcatatatgatctacccgctaggttagcaaagtgtatcaaatcagaagcctat
gctgatgctgtgaaatactacactggagccatgcccattttcaaggcatatggagactct
tcgttccaggattgcaaaagagcctcagaggaagcaattgctgttattacaacgcacttg
cagggaaaggtattttcagattctgaatcaatacaagccagggctgaagctgttatgctc
cttaagcagttaaattttccggttgataatttgaaggtgcaactatttgaaaagttagaa
cagttccttgtggatctccatctggaatctaaggaactaccccctgcttcagtagatcaa
ggaaatcttcctgaatcagctacttctgctgctcatgaggcttctattcgtgaattttcc
gaggctgtccgtgcttatcgagttattttccatgattcagaacagcaactttccagactt
gctcagaacttacctaaaatgcactttgaatccacccagaagcacatcaagaaacaactt
gcttcttctgatcttgttgccatgttaaggattatttggactgatgtgcttctcatggat
ggagtgttgcctgaggctggtctgcgtgatattactatggaggctgctcatgttgccgtt
aaacaatacgttgctagcagatttagccatcttctacttgatatttcaggtgctgtcgtc
aaagtaggtaatcaaatggagggtcttgaagaaaaaaattctttgcaggccatccttgag
gccagtaaaaaggcagtagtgcaaggcagtatggatgtcttacgggatttccgtcaactt
cttgatgaaaacttggaactgctttctaagttgagagatttggttattgactgggtacaa
gaaggatttcaggacttcttcaggaaacttaatgatcattttctcttactttctggaaag
aaatatccagccggtcaagatctaagctttcatgagggaatacagagagacaaaatactt
cctgcgcttgttcttgtgctggctcaactctctgtttttgttgagcaaaatgccattccc
agaattaccgaggaaattgcctcatctttctctggtggtgggtctcggggctatgaaaat
ggtccagcttttgttcctgcagaaatttgtcgcaccttcagagcagctggtgaaaaattc
ttgcagcattatattaacatgagaactcagaagatatcagttgtcttgaataaaaggttt
acaacgccaaattgggtcaagcataaagagcccagagaagttcatatgtttgttgatctg
cttcttcaagagctagatagtatcattaaagaagtaaagaatatgttgcctgaagggatc
cagcgtaagcatcgccgttctgacagcagtgggagcagcatttcctcccgtagtaatcca
ttaagagatgacagaatggtacggtcaaatacccagcaggcgagaagtcaactccttgag
tcccatttggcgaaattgtttaagcagaagatggaaattttcacaaaagttgaacataca
caggactcagtaataactactatcgtgaaactttgcttgaagagtttacaagaatttgtc
cgacttcagacttttaaccgtagtggatttcaacaaattcagctggacatccattttctt
aaaactactctgaaggacactgccgatgatgaagctgctgttgattttttgcttgatgag
gtaattgttgctgctgctgagcgatgtcttgatccaattcctctggaaccttctatcctg
gacaggcttacccaagcaaagctggctaaggctcgggagcagagtcctacctcataa
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