Solanum pennellii: 107023708
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Entry
107023708 CDS
T04130
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107023708
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107023708
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107023708
03019 Messenger RNA biogenesis [BR:
spen03019
]
107023708
03041 Spliceosome [BR:
spen03041
]
107023708
Enzymes [BR:
spen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107023708
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
107023708
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107023708
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107023708
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107023708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
107023708
NCBI-ProteinID:
XP_015079971
LinkDB
All DBs
Position
6:complement(929637..940399)
Genome browser
AA seq
319 aa
AA seq
DB search
MAQNEHQQQQQQQQGLIEPAVLDDIINRLLEFRNARTVRQVQISEAEIRSLCSASREIFL
QQPNLLELEAPIKICGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLL
LAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVKLWKCFTECFNCLPVAALIDE
KILCMHGGLSPDLTNLDQIRNLPRPTDVPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTF
GPDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDE
SLMCSFQILKPTDRKPRFL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaatgagcatcaacagcagcagcagcagcagcaagggttaatagagcctgct
gttcttgatgatattatcaataggcttttggagtttagaaatgcaagaactgttaggcag
gttcagatttctgaggctgagatccgttccctttgtagtgcttcaagggaaatctttctt
caacaacctaatctccttgaacttgaagcacccatcaagatctgtggtgacattcatggc
cagtatggtgatcttttgaggctttttgaatatgggggatttcctcctgaggctaactat
ttgtttttaggggactatgtggaccgtggtaaacagagtttggaaacaatatgccttctg
cttgcatacaaaatcaaatatcctgaaaacttctttctcttgagaggaaatcatgaatgt
gcttctattaatcggatttatggtttctatgatgaatgtaagcgccgattcaatgtgaag
ctatggaaatgcttcacagaatgtttcaattgtcttcccgttgctgctctcatagatgag
aaaatactgtgcatgcatggtggtctttctccagatttaacaaacttggatcagataaga
aatttacctcgtccaactgatgttccagattctgggttgctgtgtgatttactttggtca
gatcctagccgggaagttaaaggttggggaatgaatgataggggagtttcatatactttt
ggtcctgataaggttgcagaattcttgatgcaacacgatatggaccttgtttgtcgtgcc
caccaggttgttgaagatggttatgaattttttgctgagaggcagctagtgacaatattt
tcggccccaaactactgtggtgaatttgataatgctggtgcaatgatgagtgttgatgaa
agtttaatgtgctcgttccagatactgaagccaacagatagaaaacctcggtttttatga
DBGET
integrated database retrieval system
