Solanum pennellii: 107023819
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Entry
107023819 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107023819
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107023819
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107023819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_6
RING_XB3-XBAT31
zf-Nse
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
107023819
NCBI-ProteinID:
XP_015080116
LinkDB
All DBs
Position
6:56374921..56380419
Genome browser
AA seq
385 aa
AA seq
DB search
MEEGKMSEDILTSAAAFVEGGIQDACDDACSICLDEFSDSDPSTVTGCKHEFHLQCILEW
CQRSSQCPMCWQPLSLKDPNSQELLDAVEHERNIRMNPPRNTTIFHHPTLGDFELQHLPV
SATDSELEERIIQHLAAAAAMGRARHIARREGQRGRSSAQIRPQYLVFSTHPNAPAAAAV
PASSSNQRSGGEPTPEVSVSGQDSPVIAVGEGSGQLLSQPPFQADEVSASGSGSNTAVNQ
LGTSSHNRRNHSQSSTNNQDRAGPSDFQSFSDSMKSRFSAMSMRCKESLTKSSRGWKERF
FSRNSSTSDNVPEPRNEVRAAVATVSHMMDHLETTDSRISSAESNILDTTLPIRHAEQHI
PESDGTHSLNEDSRQSPCAASSGSN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcaagatgtctgaggatattttgacttcggctgcagcatttgtggaaggt
ggaattcaggatgcctgcgatgatgcttgcagcatatgtcttgacgaattttctgatagt
gatccttctacagtgacaggctgcaagcatgagttccatcttcagtgtattctagaatgg
tgtcaaagaagctcccagtgccccatgtgttggcaacctctcagcttgaaagaccccaac
agccaggaattgttggatgcagtagagcacgagaggaacatcaggatgaatcctcctaga
aacaccacaatcttccaccatccaactttaggagattttgagttgcagcatttaccggta
agcgcaactgactctgagcttgaagagcgtatcattcagcacttagctgctgcggctgcc
atgggaagggcacgccacattgctagaagggaaggtcagcgaggtaggtcctcagctcaa
attcgtccccaatatctggtgttttcaactcacccaaatgctcctgctgctgctgctgtt
cctgcttcatcttctaaccagaggagtgggggtgaacccactcctgaagtctcggtttct
ggtcaggattctccagttattgctgttggagaaggttcgggacaactactttctcaacct
ccttttcaagctgatgaggtttctgcctctgggtcaggatcaaatactgctgttaatcaa
cttgggacttcgtcacataataggaggaatcattctcaatcttctactaacaatcaagac
agagccggaccatcagattttcagtctttttcagattctatgaagtctcggtttagtgca
atgtcaatgagatgcaaagaatctttaaccaagagttcaaggggttggaaggagagattt
ttctctcgcaacagttcaacatcagacaatgttcccgaacctaggaatgaagtgagggca
gctgttgccactgtatcacacatgatggaccatctggaaactacagatagcagaatcagt
tctgctgaatcaaatatactggacactactttacctatcagacatgctgagcagcatata
cctgagagtgatggtactcattctttaaatgaggatagtaggcaatccccgtgtgctgca
agttctggttcaaactga
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