Solanum pennellii: 107023835
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Entry
107023835 CDS
T04130
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
spen04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107023835
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107023835
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107023835
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107023835
03036 Chromosome and associated proteins [BR:
spen03036
]
107023835
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107023835
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107023835
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107023835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
107023835
NCBI-ProteinID:
XP_015080136
UniProt:
A0ABM1H491
LinkDB
All DBs
Position
6:complement(49693888..49705810)
Genome browser
AA seq
512 aa
AA seq
DB search
MNAGDGGASAGTPAPLEWKFSQVFGERTAGEEVQEVDVISAIEFDRTGDHLATGDRGGRV
VLFERTDAKEHAGSRRELERMDYPVARHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIR
WCQMANGALFLLSTNDKTIKFWKVQEKKVKKISDLNIDPSRGVAKGSMPSSSVSSRQKQY
PANGCYTDGSSECLSNDLSFPPGGLPGLRLPVVTSGETSLAARCRRVYAHAHDYHINSIS
TNCDGETFISADDLRINLWNLQISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHCNILAY
SSSRGSIRLVDMRQSALCDSHSKLFEEQETPGSRSFFTEIIASISDIKFAKAGRYILSRD
YMTLKLWDINMDSGPVSTFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGSRVATGSYSN
LFRVFGCAPGSAEATTLEASKNPRRQVQTPSRPSRSLSSSITRVVRRGSESPGADANGNS
FDFTTKLLHLTWHPTENSIACAAANSLYMYYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctggtgatggtggagcttcggcgggaacaccagctccattggagtggaaattc
tctcaggtatttggtgaacgtacggccggcgaagaagttcaggaagttgatgtcatttca
gctattgagtttgatagaactggcgaccatcttgccaccggggatcgagggggtagggtg
gtgttatttgaaaggaccgatgcgaaggagcatgctggaagccgaagagaattagagaga
atggattatccagtcgctcggcatcccgaattccgttacaagacagagtttcaaagccat
gagcccgagtttgattatttgaagagtttggagattgaggagaagatcaataagatccgg
tggtgccaaatggctaatggtgccctcttccttttgtctactaatgacaaaactattaag
ttctggaaggtccaagagaagaaagttaagaagatatctgatctgaatatcgacccttcc
agaggtgttgcaaaaggtagcatgcccagttcaagcgtttcttcccgtcaaaaacagtat
cctgcaaatgggtgctacacagatggatcttctgaatgtttaagcaatgatttgtcgttt
ccacctggtggtcttcctggattacgcttacctgtggttactagcggtgagaccagcctt
gctgctagatgtagaagagtgtatgcccatgcacatgactatcatatcaattctatttca
actaactgtgatggggaaacatttatatcagctgatgatctccgtataaacctttggaac
ttgcaaataagcaatcaaagtttcaatattgttgatgtcaagccaacaaatatggaagat
ctaactgaggtgataacttcagctgaatttcaccctactcactgtaacatattggcttat
agtagttcaagaggatcaatacgtttggtagatatgcggcagtcagcattgtgcgactcg
cactctaagttgtttgaggagcaggaaactcctggctcaaggtccttttttaccgagata
attgcttcaatttcagatataaaatttgcaaaggctggaagatacatactcagtcgtgac
tatatgaccctgaagctatgggatataaacatggattctggtccagtttcaacttttcag
gttcatgaacatttgagaccaaagctgtgtgatttatatgagaatgattccatctttgat
aaatttgagtgttgccttagtggtgatggttctcgagtagcaactggatcttatagcaat
ctttttcgtgtgttcggttgtgctccgggaagcgcagaagcgactacattagaagcgagc
aaaaaccccaggagacaagtccagaccccttcgaggccttccaggtccttgagcagcagt
ataacccgtgttgtcaggagaggatcagaaagtcctggggctgatgccaatggaaactca
tttgatttcacaaccaaactgctccaccttacatggcatccaactgaaaattcaattgca
tgtgctgctgcaaacagcttgtacatgtattatgcataa
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